Fitness for 5 genes in Azospirillum sp. SherDot2

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Top 30 experiments (either direction), sorted by average fitness

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500 ntMPMX19_02776 and MPMX19_02777 overlap by 14 nucleotidesMPMX19_02777 and MPMX19_02778 overlap by 4 nucleotidesMPMX19_02778 and MPMX19_02779 overlap by 4 nucleotidesMPMX19_02779 and MPMX19_02780 are separated by 37 nucleotides MPMX19_02776: MPMX19_02776 - High-affinity branched-chain amino acid transport system permease protein LivH, at 8,737 to 9,651 _02776 MPMX19_02777: MPMX19_02777 - hypothetical protein, at 9,638 to 10,690 _02777 MPMX19_02778: MPMX19_02778 - Lipopolysaccharide export system ATP-binding protein LptB, at 10,687 to 11,457 _02778 MPMX19_02779: MPMX19_02779 - High-affinity branched-chain amino acid transport ATP-binding protein LivF, at 11,454 to 12,179 _02779 MPMX19_02780: MPMX19_02780 - hypothetical protein, at 12,217 to 12,693 _02780
Group Condition MPMX19_02776 MPMX19_02777 MPMX19_02778 MPMX19_02779 MPMX19_02780
nf_with10percent_fulln NF_with10percent_fullN -0.6 +0.0 -0.9 +0.3 -0.5
mgl MGL +0.1 +0.0 -1.2 -0.5 +0.2
mgl MGL -0.0 -0.3 +0.3 -1.2 +0.2
nf_with10percent_fulln NF_with10percent_fullN -0.3 -0.0 -0.2 +0.5 -0.8
nln NLN -0.0 -0.2 +0.3 -0.7 -0.2
nl-ccm; high oxygen NL-CCM; high oxygen -0.1 -0.1 +0.4 -1.3 +0.3
nl-ccm_agar NL-CCM_agar +0.1 +0.1 -0.4 -0.5 +0.1
nf NF +0.1 -0.2 +0.4 -0.8 -0.0
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum +0.0 -0.0 +0.3 -0.8 +0.3
nf_with_fulln NF_with_fullN +0.1 +0.1 -0.7 +0.8 -0.5
nl-ccm_agar NL-CCM_agar +0.0 +0.1 +0.2 -0.9 +0.4
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum +0.1 +0.1 +0.5 -1.1 +0.2
nl-ccm; spin-x control NL-CCM; spin-x control -0.1 +0.1 +0.6 -0.6 -0.0
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum +0.2 +0.1 +0.3 -0.9 +0.3
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum +0.2 +0.3 -0.3 -0.5 +0.3
nf_with_fulln NF_with_fullN -0.0 +0.0 +0.5 -0.6 +0.0
nf_with10percent_fulln NF_with10percent_fullN -0.0 +0.1 +0.7 -0.6 -0.2
nl-ccm NL-CCM, start OD=0.3 +0.1 +0.4 +0.9 -0.7 -0.6
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum +0.2 -0.1 +0.2 -0.4 +0.5
nl-ccm NL-CCM, start OD=0.1 -0.1 +0.2 +0.3 -0.3 +0.4
nl-ccm_agar NL-CCM_agar +0.2 +0.0 +0.5 -0.3 +0.2
nl-ccm; spin-x control NL-CCM; spin-x control +0.2 +0.2 +0.9 -0.8 +0.1
nf_with_fulln NF_with_fullN +0.1 -0.0 +0.6 +0.2 -0.3
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.0 +0.1 +0.9 -0.1 -0.2
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum +0.1 +0.1 +0.6 -0.6 +0.5
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.2 -0.1 +0.5 +0.4 -0.2
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.1 +0.1 +0.2 +0.6 +0.2
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum +0.2 -0.0 +0.6 +0.6 +0.1
mgl MGL -0.4 +0.0 +0.8 +1.5 -0.2
mgl MGL +0.5 -0.2 +1.2 +0.2 +0.0
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