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Fitness for 4 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_02764 and MPMX19_02765 are separated by 31 nucleotides
MPMX19_02765 and MPMX19_02766 are separated by 108 nucleotides
MPMX19_02766 and MPMX19_02767 are separated by 195 nucleotides
MPMX19_02764: MPMX19_02764 - Formamidopyrimidine-DNA glycosylase, at 2,909,291 to 2,910,133
_02764
MPMX19_02765: MPMX19_02765 - hypothetical protein, at 2,910,165 to 2,910,599
_02765
MPMX19_02766: MPMX19_02766 - putative enoyl-CoA hydratase echA8, at 2,910,708 to 2,911,484
_02766
MPMX19_02767: MPMX19_02767 - 30S ribosomal protein S20, at 2,911,680 to 2,911,940
_02767
Group
Condition
MPMX19
_02764
MPMX19
_02765
MPMX19
_02766
MPMX19
_02767
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
-0.7
+0.0
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
-0.2
+0.1
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.0
-0.4
+0.0
N.D.
nf_with_fulln
NF_with_fullN
-0.2
+0.1
-0.3
N.D.
nf_with_fulln
NF_with_fullN
-0.2
+0.1
-0.3
N.D.
nln
NLN
+0.1
-0.3
-0.1
N.D.
mgl
MGL
+0.2
-0.4
+0.1
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.2
-0.4
-0.0
N.D.
mgl
MGL
+0.1
-0.2
+0.1
N.D.
mgl
MGL
+0.2
-0.2
-0.0
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
-0.2
+0.0
N.D.
nl-ccm
NL-CCM, start OD=0.3
+0.2
-0.3
+0.1
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
+0.4
-0.1
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
+0.3
+0.0
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.2
-0.1
+0.2
N.D.
nln
NLN
-0.1
+0.3
+0.1
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
-0.0
+0.4
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.2
-0.1
+0.3
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
+0.3
+0.2
N.D.
mgl
MGL
+0.2
+0.1
+0.1
N.D.
nl-ccm
NL-CCM, start OD=0.1
+0.1
+0.2
+0.1
N.D.
nf
NF
+0.1
+0.3
-0.0
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
+0.2
+0.1
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
+0.3
+0.0
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
+0.2
+0.2
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
+0.2
+0.1
N.D.
nln
NLN
+0.0
+0.3
+0.1
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.2
+0.5
-0.1
N.D.
nl-ccm_agar
NL-CCM_agar
+0.3
+0.1
+0.2
N.D.
nf
NF
+0.2
+0.3
+0.2
N.D.
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