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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_02733 and MPMX19_02734 are separated by 338 nucleotides
MPMX19_02734 and MPMX19_02735 are separated by 30 nucleotides
MPMX19_02735 and MPMX19_02736 are separated by 227 nucleotides
MPMX19_02736 and MPMX19_02737 overlap by 4 nucleotides
MPMX19_02733: MPMX19_02733 - Regulatory protein LuxO, at 2,877,339 to 2,878,754
_02733
MPMX19_02734: MPMX19_02734 - Cold shock-like protein CspE, at 2,879,093 to 2,879,302
_02734
MPMX19_02735: MPMX19_02735 - Sensor histidine kinase RcsC, at 2,879,333 to 2,880,217
_02735
MPMX19_02736: MPMX19_02736 - Tryptophan synthase beta chain, at 2,880,445 to 2,881,662
_02736
MPMX19_02737: MPMX19_02737 - Tryptophan synthase alpha chain, at 2,881,659 to 2,882,504
_02737
Group
Condition
MPMX19
_02733
MPMX19
_02734
MPMX19
_02735
MPMX19
_02736
MPMX19
_02737
nln
NLN
+0.1
N.D.
-0.4
-2.5
-1.9
nln
NLN
+0.0
N.D.
+0.2
-2.5
-2.2
nln
NLN
+0.0
N.D.
+0.2
-2.2
-2.4
nln
NLN
+0.3
N.D.
+0.2
-2.3
-2.6
nln
NLN
+0.2
N.D.
+0.5
-2.3
-2.3
mgl
MGL
+0.1
N.D.
-1.3
-0.0
-1.2
nln
NLN
-0.1
N.D.
+0.2
-1.3
-1.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.0
N.D.
-1.1
-0.5
-0.5
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
N.D.
-0.6
-0.5
-1.1
nf_with_fulln
NF_with_fullN
-0.2
N.D.
-0.5
-1.2
-0.2
nl-ccm
NL-CCM, start OD=0.1
-0.1
N.D.
-0.4
-0.7
-0.8
nl-ccm_agar
NL-CCM_agar
+0.2
N.D.
-0.2
-0.8
-1.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.3
N.D.
-0.6
-0.5
-1.1
nl-ccm_agar
NL-CCM_agar
+0.3
N.D.
-0.1
-0.8
-1.1
nf_with_fulln
NF_with_fullN
+0.0
N.D.
+0.3
-1.3
-0.7
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
N.D.
+0.3
-0.9
-0.9
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.4
N.D.
-0.4
-0.9
-0.5
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.4
N.D.
-0.0
-0.6
-1.1
nf_with_fulln
NF_with_fullN
+0.0
N.D.
+0.9
-1.1
-1.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.5
N.D.
+0.1
-0.8
-1.1
nln
NLN
+0.0
N.D.
+0.6
-1.4
-0.3
mgl
MGL
+0.1
N.D.
+0.5
-0.7
-0.9
nl-ccm_agar
NL-CCM_agar
+0.1
N.D.
+0.5
-0.6
-0.9
nln
NLN
+0.1
N.D.
+0.7
-1.2
-0.4
nln
NLN
-0.0
N.D.
+1.0
-1.3
-0.4
nl-ccm_agar
NL-CCM_agar
+0.6
N.D.
+0.2
-0.7
-0.8
nf_with_fulln
NF_with_fullN
-0.4
N.D.
+1.0
-1.0
-0.1
nl-ccm_agar
NL-CCM_agar
+0.4
N.D.
+0.9
-0.7
-0.9
nf_with_fulln
NF_with_fullN
-0.1
N.D.
+1.0
-1.1
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.6
N.D.
-0.7
+0.8
+1.1
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