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Protein
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Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_02724 and MPMX19_02725 are separated by 1 nucleotides
MPMX19_02725 and MPMX19_02726 overlap by 1 nucleotides
MPMX19_02726 and MPMX19_02727 are separated by 67 nucleotides
MPMX19_02727 and MPMX19_02728 are separated by 325 nucleotides
MPMX19_02724: MPMX19_02724 - N-acetylmuramate alpha-1-phosphate uridylyltransferase, at 2,864,782 to 2,865,522
_02724
MPMX19_02725: MPMX19_02725 - N-acetylmuramate/N-acetylglucosamine kinase, at 2,865,524 to 2,866,552
_02725
MPMX19_02726: MPMX19_02726 - tRNA threonylcarbamoyladenosine biosynthesis protein TsaE, at 2,866,552 to 2,867,034
_02726
MPMX19_02727: MPMX19_02727 - hypothetical protein, at 2,867,102 to 2,867,539
_02727
MPMX19_02728: MPMX19_02728 - Ferredoxin--NADP reductase, at 2,867,865 to 2,868,902
_02728
Group
Condition
MPMX19
_02724
MPMX19
_02725
MPMX19
_02726
MPMX19
_02727
MPMX19
_02728
mgl
MGL
+0.1
-0.1
N.D.
-1.8
N.D.
mgl
MGL
-0.5
-0.0
N.D.
-0.9
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
+0.0
N.D.
-1.6
N.D.
mgl
MGL
-0.5
+0.3
N.D.
-1.0
N.D.
mgl
MGL
-0.3
-0.1
N.D.
-0.7
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
-0.0
N.D.
-0.7
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
-0.2
N.D.
-0.7
N.D.
nl-ccm
NL-CCM, start OD=0.3
-0.1
+0.1
N.D.
-0.6
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
+0.1
N.D.
-0.8
N.D.
nln
NLN
+0.1
+0.1
N.D.
-0.7
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
+0.2
N.D.
-0.6
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.3
+0.1
N.D.
-0.3
N.D.
mgl
MGL
+0.1
+0.0
N.D.
-0.6
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
+0.2
N.D.
-0.5
N.D.
nl-ccm
NL-CCM, start OD=0.1
-0.0
+0.1
N.D.
-0.5
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
+0.1
N.D.
-0.3
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
+0.1
N.D.
-0.5
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
+0.1
N.D.
-0.4
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.2
+0.2
N.D.
-0.6
N.D.
nf_with_fulln
NF_with_fullN
+0.2
+0.2
N.D.
-0.6
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.0
+0.2
N.D.
-0.4
N.D.
nl-ccm_agar
NL-CCM_agar
+0.2
+0.2
N.D.
-0.4
N.D.
nf
NF
+0.2
+0.1
N.D.
-0.4
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
-0.1
N.D.
-0.4
N.D.
nln
NLN
+0.3
+0.1
N.D.
-0.2
N.D.
nl-ccm
NL-CCM, start OD=0.1
+0.3
+0.1
N.D.
-0.2
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.3
+0.2
N.D.
+0.4
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
+0.1
N.D.
+0.6
N.D.
nf
NF
+0.0
+0.1
N.D.
+0.5
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.0
+0.2
N.D.
+0.5
N.D.
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