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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_02722 and MPMX19_02723 are separated by 166 nucleotides
MPMX19_02723 and MPMX19_02724 are separated by 76 nucleotides
MPMX19_02724 and MPMX19_02725 are separated by 1 nucleotides
MPMX19_02725 and MPMX19_02726 overlap by 1 nucleotides
MPMX19_02722: MPMX19_02722 - ATP-dependent helicase/nuclease subunit A, at 2,858,054 to 2,861,575
_02722
MPMX19_02723: MPMX19_02723 - hypothetical protein, at 2,861,742 to 2,864,705
_02723
MPMX19_02724: MPMX19_02724 - N-acetylmuramate alpha-1-phosphate uridylyltransferase, at 2,864,782 to 2,865,522
_02724
MPMX19_02725: MPMX19_02725 - N-acetylmuramate/N-acetylglucosamine kinase, at 2,865,524 to 2,866,552
_02725
MPMX19_02726: MPMX19_02726 - tRNA threonylcarbamoyladenosine biosynthesis protein TsaE, at 2,866,552 to 2,867,034
_02726
Group
Condition
MPMX19
_02722
MPMX19
_02723
MPMX19
_02724
MPMX19
_02725
MPMX19
_02726
mgl
MGL
N.D.
N.D.
-0.5
-0.0
N.D.
mgl
MGL
N.D.
N.D.
-0.3
-0.1
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
-0.3
-0.0
N.D.
nf_with_fulln
NF_with_fullN
N.D.
N.D.
-0.3
-0.0
N.D.
mgl
MGL
N.D.
N.D.
-0.5
+0.3
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
N.D.
-0.3
+0.1
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
N.D.
-0.3
+0.2
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
N.D.
-0.2
+0.1
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
N.D.
-0.2
+0.1
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
+0.2
-0.2
N.D.
mgl
MGL
N.D.
N.D.
+0.1
-0.1
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
-0.2
+0.1
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
N.D.
-0.2
+0.2
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
-0.1
+0.2
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
-0.1
+0.2
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
N.D.
+0.1
+0.2
N.D.
nln
NLN
N.D.
N.D.
+0.1
+0.2
N.D.
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
+0.1
+0.2
N.D.
nf
NF
N.D.
N.D.
+0.2
+0.1
N.D.
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
+0.1
+0.2
N.D.
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
+0.2
+0.2
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
N.D.
+0.1
+0.2
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
N.D.
+0.2
+0.1
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
N.D.
+0.2
+0.2
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
N.D.
+0.2
+0.2
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
+0.5
-0.1
N.D.
nf_with_fulln
NF_with_fullN
N.D.
N.D.
+0.2
+0.2
N.D.
nl-ccm
NL-CCM, start OD=0.1
N.D.
N.D.
+0.3
+0.1
N.D.
nln
NLN
N.D.
N.D.
+0.2
+0.3
N.D.
nln
NLN
N.D.
N.D.
+0.3
+0.1
N.D.
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