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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_02555 and MPMX19_02556 are separated by 68 nucleotides
MPMX19_02556 and MPMX19_02557 are separated by 92 nucleotides
MPMX19_02557 and MPMX19_02558 are separated by 436 nucleotides
MPMX19_02558 and MPMX19_02559 overlap by 4 nucleotides
MPMX19_02555: MPMX19_02555 - hypothetical protein, at 2,671,450 to 2,671,878
_02555
MPMX19_02556: MPMX19_02556 - Ferrochelatase, at 2,671,947 to 2,673,101
_02556
MPMX19_02557: MPMX19_02557 - Uroporphyrinogen decarboxylase, at 2,673,194 to 2,674,297
_02557
MPMX19_02558: MPMX19_02558 - Putative pyruvate, phosphate dikinase regulatory protein, at 2,674,734 to 2,675,573
_02558
MPMX19_02559: MPMX19_02559 - 7-methyl-GTP pyrophosphatase, at 2,675,570 to 2,676,175
_02559
Group
Condition
MPMX19
_02555
MPMX19
_02556
MPMX19
_02557
MPMX19
_02558
MPMX19
_02559
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
N.D.
N.D.
N.D.
-1.2
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
N.D.
N.D.
-1.1
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
N.D.
N.D.
-1.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
N.D.
-1.1
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
N.D.
N.D.
-1.0
nln
NLN
N.D.
N.D.
N.D.
N.D.
-0.9
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
N.D.
N.D.
N.D.
-0.9
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
N.D.
-0.8
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
N.D.
N.D.
N.D.
-0.8
nln
NLN
N.D.
N.D.
N.D.
N.D.
-0.7
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
N.D.
N.D.
-0.6
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
N.D.
N.D.
-0.6
nln
NLN
N.D.
N.D.
N.D.
N.D.
-0.6
nl-ccm
NL-CCM, start OD=0.1
N.D.
N.D.
N.D.
N.D.
-0.6
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
N.D.
-0.6
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
N.D.
-0.5
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
N.D.
N.D.
-0.5
nf
NF
N.D.
N.D.
N.D.
N.D.
-0.5
nf_with_fulln
NF_with_fullN
N.D.
N.D.
N.D.
N.D.
-0.5
nf
NF
N.D.
N.D.
N.D.
N.D.
-0.4
mgl
MGL
N.D.
N.D.
N.D.
N.D.
-0.4
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
N.D.
N.D.
-0.4
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
N.D.
-0.4
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
N.D.
N.D.
N.D.
+0.4
mgl
MGL
N.D.
N.D.
N.D.
N.D.
+0.5
nln
NLN
N.D.
N.D.
N.D.
N.D.
+0.5
mgl
MGL
N.D.
N.D.
N.D.
N.D.
+0.6
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
N.D.
+0.6
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
N.D.
N.D.
+0.7
mgl
MGL
N.D.
N.D.
N.D.
N.D.
+0.8
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