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Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_02548 and MPMX19_02549 are separated by 5 nucleotides
MPMX19_02549 and MPMX19_02550 are separated by 136 nucleotides
MPMX19_02550 and MPMX19_02551 are separated by 16 nucleotides
MPMX19_02551 and MPMX19_02552 are separated by 236 nucleotides
MPMX19_02548: MPMX19_02548 - ATP-dependent protease subunit HslV, at 2,664,138 to 2,664,701
_02548
MPMX19_02549: MPMX19_02549 - ATP-dependent protease ATPase subunit HslU, at 2,664,707 to 2,666,053
_02549
MPMX19_02550: MPMX19_02550 - Membrane-bound lytic murein transglycosylase A, at 2,666,190 to 2,667,392
_02550
MPMX19_02551: MPMX19_02551 - hypothetical protein, at 2,667,409 to 2,668,104
_02551
MPMX19_02552: MPMX19_02552 - hypothetical protein, at 2,668,341 to 2,668,988
_02552
Group
Condition
MPMX19
_02548
MPMX19
_02549
MPMX19
_02550
MPMX19
_02551
MPMX19
_02552
mgl
MGL
-0.2
-0.2
-0.0
-1.9
N.D.
mgl
MGL
-0.2
-0.2
-0.2
-1.7
N.D.
mgl
MGL
-0.5
-0.3
-0.6
-0.6
N.D.
mgl
MGL
-0.4
-0.1
+0.1
-1.4
N.D.
nf_with_fulln
NF_with_fullN
-0.1
-0.2
+0.1
-1.5
N.D.
nf_with_fulln
NF_with_fullN
-0.4
-0.4
+0.1
-1.0
N.D.
nln
NLN
-0.2
-0.2
-0.4
-0.7
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
-0.1
-0.1
-1.1
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
-0.4
-0.1
-0.8
N.D.
nln
NLN
+0.1
-0.4
-0.2
-0.8
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
-0.2
+0.1
-0.7
N.D.
nln
NLN
-0.2
-0.3
-0.0
-0.7
N.D.
nl-ccm_agar
NL-CCM_agar
-0.2
-0.3
-0.1
-0.6
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.0
-0.5
-0.0
-0.7
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.0
-0.2
-0.2
-0.7
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.0
-0.1
-0.2
-0.6
N.D.
nln
NLN
-0.4
-0.3
-0.0
-0.3
N.D.
nl-ccm_agar
NL-CCM_agar
+0.1
-0.3
-0.0
-0.7
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
-0.4
+0.1
-0.9
N.D.
mgl
MGL
+0.4
-0.4
-0.1
-0.7
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.3
-0.1
-0.1
-0.9
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
+0.0
+0.0
-0.9
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.2
-0.3
-0.2
-0.3
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.3
-0.2
-0.3
-0.4
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
-0.3
+0.2
-0.4
N.D.
nl-ccm
NL-CCM, start OD=0.1
+0.4
-0.2
-0.3
-0.4
N.D.
nl-ccm
NL-CCM, start OD=0.3
+0.4
-0.3
-0.2
-0.2
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.3
-0.3
-0.2
+0.3
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.4
-0.1
-0.1
+0.3
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.0
-0.3
+0.1
+0.9
N.D.
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