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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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500 nt
MPMX19_02542 and MPMX19_02543 overlap by 1 nucleotides
MPMX19_02543 and MPMX19_02544 are separated by 61 nucleotides
MPMX19_02544 and MPMX19_02545 are separated by 4 nucleotides
MPMX19_02545 and MPMX19_02546 are separated by 61 nucleotides
MPMX19_02542: MPMX19_02542 - Imidazole glycerol phosphate synthase subunit HisF, at 2,658,906 to 2,659,691
_02542
MPMX19_02543: MPMX19_02543 - 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, at 2,659,691 to 2,660,437
_02543
MPMX19_02544: MPMX19_02544 - hypothetical protein, at 2,660,499 to 2,661,041
_02544
MPMX19_02545: MPMX19_02545 - Imidazole glycerol phosphate synthase subunit HisH, at 2,661,046 to 2,661,690
_02545
MPMX19_02546: MPMX19_02546 - Histidine biosynthesis bifunctional protein HisB, at 2,661,752 to 2,662,414
_02546
Group
Condition
MPMX19
_02542
MPMX19
_02543
MPMX19
_02544
MPMX19
_02545
MPMX19
_02546
nln
NLN
N.D.
-3.4
-0.3
N.D.
N.D.
nf_with_fulln
NF_with_fullN
N.D.
-2.6
-1.1
N.D.
N.D.
nln
NLN
N.D.
-3.3
-0.2
N.D.
N.D.
nf_with_fulln
NF_with_fullN
N.D.
-2.1
-1.1
N.D.
N.D.
nln
NLN
N.D.
-2.7
-0.4
N.D.
N.D.
nln
NLN
N.D.
-2.7
-0.3
N.D.
N.D.
nf_with_fulln
NF_with_fullN
N.D.
-2.5
-0.4
N.D.
N.D.
nln
NLN
N.D.
-2.6
-0.3
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
-2.5
-0.3
N.D.
N.D.
nf_with_fulln
NF_with_fullN
N.D.
-1.9
-0.9
N.D.
N.D.
nl-ccm_agar
NL-CCM_agar
N.D.
-2.5
-0.2
N.D.
N.D.
nln
NLN
N.D.
-2.3
-0.3
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
-1.6
-1.0
N.D.
N.D.
nln
NLN
N.D.
-2.1
-0.5
N.D.
N.D.
nln
NLN
N.D.
-2.3
-0.3
N.D.
N.D.
nl-ccm
NL-CCM, start OD=0.1
N.D.
-2.1
-0.4
N.D.
N.D.
mgl
MGL
N.D.
-1.6
-0.8
N.D.
N.D.
nln
NLN
N.D.
-2.0
-0.4
N.D.
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-1.8
-0.5
N.D.
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
-1.0
-1.2
N.D.
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
-1.7
-0.5
N.D.
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
-1.7
-0.5
N.D.
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
-1.6
-0.5
N.D.
N.D.
nln
NLN
N.D.
-1.6
-0.5
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
-1.4
-0.7
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
-2.0
+0.0
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
-2.0
+0.1
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+1.3
-1.5
N.D.
N.D.
nl-ccm
NL-CCM, start OD=0.3
N.D.
+1.1
-1.1
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+1.3
-1.0
N.D.
N.D.
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