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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_02533 and MPMX19_02534 are separated by 14 nucleotides
MPMX19_02534 and MPMX19_02535 overlap by 1 nucleotides
MPMX19_02535 and MPMX19_02536 overlap by 1 nucleotides
MPMX19_02536 and MPMX19_02537 are separated by 45 nucleotides
MPMX19_02533: MPMX19_02533 - Cytochrome c-type biogenesis protein CcmF, at 2,651,406 to 2,653,412
_02533
MPMX19_02534: MPMX19_02534 - Thiol:disulfide interchange protein DsbE, at 2,653,427 to 2,653,996
_02534
MPMX19_02535: MPMX19_02535 - Cytochrome c-type biogenesis protein CcmH, at 2,653,996 to 2,654,478
_02535
MPMX19_02536: MPMX19_02536 - hypothetical protein, at 2,654,478 to 2,655,911
_02536
MPMX19_02537: MPMX19_02537 - Shikimate dehydrogenase-like protein, at 2,655,957 to 2,656,793
_02537
Group
Condition
MPMX19
_02533
MPMX19
_02534
MPMX19
_02535
MPMX19
_02536
MPMX19
_02537
nln
NLN
N.D.
N.D.
N.D.
-0.9
-0.1
mgl
MGL
N.D.
N.D.
N.D.
-0.7
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
N.D.
-0.5
-0.2
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
N.D.
-0.7
-0.0
mgl
MGL
N.D.
N.D.
N.D.
-0.4
-0.3
nf_with_fulln
NF_with_fullN
N.D.
N.D.
N.D.
-0.7
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
N.D.
-0.6
-0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
N.D.
N.D.
-0.3
-0.2
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
N.D.
-0.4
-0.0
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
N.D.
-0.4
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
N.D.
-0.6
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
-0.4
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
N.D.
-0.3
+0.3
nln
NLN
N.D.
N.D.
N.D.
+0.4
-0.2
nln
NLN
N.D.
N.D.
N.D.
+0.4
-0.1
nln
NLN
N.D.
N.D.
N.D.
+0.4
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
+0.3
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
+0.3
+0.2
nl-ccm
NL-CCM, start OD=0.3
N.D.
N.D.
N.D.
+0.5
-0.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
N.D.
N.D.
+0.4
+0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
N.D.
N.D.
+0.5
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
+0.4
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
+0.6
-0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
N.D.
N.D.
+0.5
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
+0.5
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
N.D.
N.D.
+0.6
+0.1
nl-ccm
NL-CCM, start OD=0.1
N.D.
N.D.
N.D.
+0.7
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
N.D.
+0.7
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
+0.7
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
N.D.
+0.7
+0.2
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