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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_02530 and MPMX19_02531 are separated by 5 nucleotides
MPMX19_02531 and MPMX19_02532 overlap by 4 nucleotides
MPMX19_02532 and MPMX19_02533 are separated by 7 nucleotides
MPMX19_02533 and MPMX19_02534 are separated by 14 nucleotides
MPMX19_02530: MPMX19_02530 - Heme exporter protein C, at 2,649,928 to 2,650,686
_02530
MPMX19_02531: MPMX19_02531 - hypothetical protein, at 2,650,692 to 2,650,937
_02531
MPMX19_02532: MPMX19_02532 - Cytochrome c-type biogenesis protein CcmE, at 2,650,934 to 2,651,398
_02532
MPMX19_02533: MPMX19_02533 - Cytochrome c-type biogenesis protein CcmF, at 2,651,406 to 2,653,412
_02533
MPMX19_02534: MPMX19_02534 - Thiol:disulfide interchange protein DsbE, at 2,653,427 to 2,653,996
_02534
Group
Condition
MPMX19
_02530
MPMX19
_02531
MPMX19
_02532
MPMX19
_02533
MPMX19
_02534
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
-2.2
-0.2
N.D.
N.D.
mgl
MGL
N.D.
-0.7
-1.3
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
-1.1
-0.7
N.D.
N.D.
nl-ccm
NL-CCM, start OD=0.1
N.D.
-1.1
-0.2
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
-1.4
+0.3
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
-0.5
-0.6
N.D.
N.D.
nl-ccm
NL-CCM, start OD=0.3
N.D.
-0.8
-0.2
N.D.
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-1.0
+0.1
N.D.
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
-1.4
+0.7
N.D.
N.D.
mgl
MGL
N.D.
-1.4
+0.8
N.D.
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
-0.8
+0.5
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
-0.8
+0.5
N.D.
N.D.
nl-ccm_agar
NL-CCM_agar
N.D.
-0.7
+0.6
N.D.
N.D.
mgl
MGL
N.D.
+0.7
-0.8
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
-0.7
+0.7
N.D.
N.D.
mgl
MGL
N.D.
-1.2
+1.2
N.D.
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
-0.3
+0.7
N.D.
N.D.
nln
NLN
N.D.
+0.7
+0.3
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
+0.6
+0.4
N.D.
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
+0.8
+0.2
N.D.
N.D.
nl-ccm_agar
NL-CCM_agar
N.D.
+0.5
+0.6
N.D.
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
+0.7
+0.5
N.D.
N.D.
mgl
MGL
N.D.
+1.4
-0.2
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+1.0
+0.2
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
+0.8
+0.4
N.D.
N.D.
nln
NLN
N.D.
+1.0
+0.2
N.D.
N.D.
nf_with_fulln
NF_with_fullN
N.D.
+1.0
+0.2
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.3
+1.2
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+1.1
+0.5
N.D.
N.D.
nln
NLN
N.D.
+1.2
+0.5
N.D.
N.D.
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