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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_02511 and MPMX19_02512 overlap by 4 nucleotides
MPMX19_02512 and MPMX19_02513 overlap by 4 nucleotides
MPMX19_02513 and MPMX19_02514 overlap by 4 nucleotides
MPMX19_02514 and MPMX19_02515 are separated by 268 nucleotides
MPMX19_02511: MPMX19_02511 - tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase, at 2,628,235 to 2,629,629
_02511
MPMX19_02512: MPMX19_02512 - PhoH-like protein, at 2,629,626 to 2,630,735
_02512
MPMX19_02513: MPMX19_02513 - Endoribonuclease YbeY, at 2,630,732 to 2,631,238
_02513
MPMX19_02514: MPMX19_02514 - hypothetical protein, at 2,631,235 to 2,632,191
_02514
MPMX19_02515: MPMX19_02515 - Apolipoprotein N-acyltransferase, at 2,632,460 to 2,634,073
_02515
Group
Condition
MPMX19
_02511
MPMX19
_02512
MPMX19
_02513
MPMX19
_02514
MPMX19
_02515
mgl
MGL
-2.6
-0.7
N.D.
-0.9
+0.1
mgl
MGL
-1.9
-0.6
N.D.
-0.5
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.7
+0.1
N.D.
-2.4
+0.2
nln
NLN
-1.7
-0.3
N.D.
-0.5
-0.0
nl-ccm_agar
NL-CCM_agar
-0.9
-0.1
N.D.
-1.4
+0.1
nl-ccm
NL-CCM, start OD=0.3
-0.5
-0.2
N.D.
-1.5
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-2.1
-0.4
N.D.
+0.3
-0.1
mgl
MGL
-1.3
+0.2
N.D.
-1.2
+0.0
mgl
MGL
-2.0
-0.4
N.D.
+0.0
+0.1
mgl
MGL
-1.6
-0.7
N.D.
+0.3
-0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
-1.3
+0.0
N.D.
-0.7
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-2.4
-0.5
N.D.
+1.3
-0.3
nl-ccm_agar
NL-CCM_agar
-1.4
-0.2
N.D.
-0.2
-0.0
mgl
MGL
-1.6
-0.3
N.D.
+0.1
-0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-1.1
-0.2
N.D.
-0.3
+0.0
nln
NLN
-0.1
-0.3
N.D.
-1.1
+0.0
nl-ccm
NL-CCM, start OD=0.1
-1.0
-0.4
N.D.
-0.0
+0.0
nl-ccm_agar
NL-CCM_agar
-0.7
+0.2
N.D.
-0.6
-0.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-1.1
-0.2
N.D.
+0.5
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-1.6
-0.2
N.D.
+0.9
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-1.0
-0.4
N.D.
+0.7
-0.1
nf_with_fulln
NF_with_fullN
-1.4
+0.2
N.D.
+0.7
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.4
-0.1
N.D.
-0.9
-0.1
nf_with_fulln
NF_with_fullN
-1.2
+0.1
N.D.
+0.6
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.6
-0.3
N.D.
+0.5
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
-1.5
-0.1
N.D.
+1.4
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.4
-0.2
N.D.
+0.9
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
-0.2
N.D.
+1.2
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.2
N.D.
+1.2
-0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.3
-0.1
N.D.
+0.9
-0.1
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