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Protein
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Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_02495 and MPMX19_02496 are separated by 165 nucleotides
MPMX19_02496 and MPMX19_02497 overlap by 4 nucleotides
MPMX19_02497 and MPMX19_02498 are separated by 119 nucleotides
MPMX19_02498 and MPMX19_02499 are separated by 151 nucleotides
MPMX19_02495: MPMX19_02495 - Ribokinase, at 2,613,528 to 2,614,535
_02495
MPMX19_02496: MPMX19_02496 - putative HTH-type transcriptional regulator, at 2,614,701 to 2,615,174
_02496
MPMX19_02497: MPMX19_02497 - 3-oxoacyl-[acyl-carrier-protein] synthase 2, at 2,615,171 to 2,616,442
_02497
MPMX19_02498: MPMX19_02498 - hypothetical protein, at 2,616,562 to 2,617,257
_02498
MPMX19_02499: MPMX19_02499 - hypothetical protein, at 2,617,409 to 2,618,287
_02499
Group
Condition
MPMX19
_02495
MPMX19
_02496
MPMX19
_02497
MPMX19
_02498
MPMX19
_02499
nf_with10percent_fulln
NF_with10percent_fullN
-1.1
-0.1
+0.3
-0.6
-1.5
mgl
MGL
-1.2
+0.0
-0.4
-0.2
-0.5
nf_with10percent_fulln
NF_with10percent_fullN
-1.2
-0.2
+0.4
-0.3
-0.8
mgl
MGL
-1.3
-0.1
-0.1
-0.0
-0.5
mgl
MGL
-1.4
-0.0
-0.0
+0.2
-0.5
nf_with10percent_fulln
NF_with10percent_fullN
-0.9
-0.2
+0.1
-0.4
-0.1
mgl
MGL
-0.9
-0.0
-0.2
-0.6
+0.4
mgl
MGL
-0.9
-0.0
-0.1
+0.3
-0.6
nf_with10percent_fulln
NF_with10percent_fullN
-1.0
+0.1
+0.0
-0.1
-0.2
mgl
MGL
-1.2
-0.4
-0.3
+0.3
+0.5
nf_with_fulln
NF_with_fullN
-0.5
-0.1
+0.1
-0.1
-0.5
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.3
-0.3
-0.0
+0.1
-0.5
nl-ccm
NL-CCM, start OD=0.1
-0.5
-0.3
-0.0
-0.0
-0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.4
-0.2
+0.1
-0.1
-0.4
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.4
-0.2
+0.1
-0.1
-0.5
nf_with10percent_fulln
NF_with10percent_fullN
-1.0
+0.1
+0.3
+0.1
-0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.2
+0.0
+0.0
+0.2
-0.7
nf_with_fulln
NF_with_fullN
-0.6
+0.2
+0.1
-0.1
-0.3
nf_with_fulln
NF_with_fullN
-0.6
+0.2
+0.2
-0.1
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.4
-0.0
-0.2
-0.1
+0.4
nf_with_fulln
NF_with_fullN
-0.3
+0.1
+0.2
-0.1
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.6
-0.1
+0.0
-0.0
+0.3
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.6
+0.1
+0.1
+0.0
+0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.5
-0.1
+0.2
+0.1
+0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.6
+0.0
-0.1
+0.0
+0.6
nl-ccm
NL-CCM, start OD=0.3
-0.5
-0.2
+0.2
+0.2
+0.2
nf_with_fulln
NF_with_fullN
-0.4
+0.3
+0.3
-0.1
+0.0
nl-ccm_agar
NL-CCM_agar
-0.4
+0.2
+0.2
-0.0
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.3
+0.0
-0.0
+0.0
+0.6
nf
NF
-0.2
+0.2
+0.2
+0.1
+0.4
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