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Cofit
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_02453 and MPMX19_02454 are separated by 302 nucleotides
MPMX19_02454 and MPMX19_02455 are separated by 23 nucleotides
MPMX19_02455 and MPMX19_02456 are separated by 116 nucleotides
MPMX19_02456 and MPMX19_02457 are separated by 733 nucleotides
MPMX19_02453: MPMX19_02453 - 23S ribosomal RNA, at 2,573,375 to 2,576,108
_02453
MPMX19_02454: MPMX19_02454 - tRNA-Ala, at 2,576,411 to 2,576,486
_02454
MPMX19_02455: MPMX19_02455 - tRNA-Ile, at 2,576,510 to 2,576,586
_02455
MPMX19_02456: MPMX19_02456 - 16S ribosomal RNA, at 2,576,703 to 2,578,184
_02456
MPMX19_02457: MPMX19_02457 - hypothetical protein, at 2,578,918 to 2,580,300
_02457
Group
Condition
MPMX19
_02453
MPMX19
_02454
MPMX19
_02455
MPMX19
_02456
MPMX19
_02457
nf_with_fulln
NF_with_fullN
N.D.
N.D.
N.D.
N.D.
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
N.D.
N.D.
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
N.D.
N.D.
-0.3
nl-ccm
NL-CCM, start OD=0.3
N.D.
N.D.
N.D.
N.D.
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
N.D.
N.D.
-0.3
nf_with_fulln
NF_with_fullN
N.D.
N.D.
N.D.
N.D.
-0.3
nf_with_fulln
NF_with_fullN
N.D.
N.D.
N.D.
N.D.
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
N.D.
N.D.
-0.2
nf
NF
N.D.
N.D.
N.D.
N.D.
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
N.D.
N.D.
N.D.
-0.2
nl-ccm
NL-CCM, start OD=0.3
N.D.
N.D.
N.D.
N.D.
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
N.D.
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
N.D.
-0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
N.D.
-0.2
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
N.D.
N.D.
-0.2
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
N.D.
N.D.
-0.2
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
N.D.
N.D.
-0.2
mgl
MGL
N.D.
N.D.
N.D.
N.D.
-0.2
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
N.D.
N.D.
-0.2
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
N.D.
N.D.
-0.2
nln
NLN
N.D.
N.D.
N.D.
N.D.
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
N.D.
N.D.
-0.2
nf_with_fulln
NF_with_fullN
N.D.
N.D.
N.D.
N.D.
-0.2
nf_with_fulln
NF_with_fullN
N.D.
N.D.
N.D.
N.D.
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
N.D.
-0.2
mgl
MGL
N.D.
N.D.
N.D.
N.D.
-0.2
mgl
MGL
N.D.
N.D.
N.D.
N.D.
-0.2
mgl
MGL
N.D.
N.D.
N.D.
N.D.
-0.2
nf
NF
N.D.
N.D.
N.D.
N.D.
-0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
N.D.
N.D.
N.D.
-0.2
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