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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_02402 and MPMX19_02403 overlap by 4 nucleotides
MPMX19_02403 and MPMX19_02404 are separated by 162 nucleotides
MPMX19_02404 and MPMX19_02405 are separated by 89 nucleotides
MPMX19_02405 and MPMX19_02406 are separated by 89 nucleotides
MPMX19_02402: MPMX19_02402 - hypothetical protein, at 2,525,410 to 2,525,808
_02402
MPMX19_02403: MPMX19_02403 - hypothetical protein, at 2,525,805 to 2,526,209
_02403
MPMX19_02404: MPMX19_02404 - LexA repressor, at 2,526,372 to 2,527,004
_02404
MPMX19_02405: MPMX19_02405 - hypothetical protein, at 2,527,094 to 2,527,387
_02405
MPMX19_02406: MPMX19_02406 - Branched-chain-amino-acid aminotransferase, at 2,527,477 to 2,528,325
_02406
Group
Condition
MPMX19
_02402
MPMX19
_02403
MPMX19
_02404
MPMX19
_02405
MPMX19
_02406
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.6
-0.1
-0.2
-1.3
-0.1
mgl
MGL
-0.3
-0.8
+0.1
-1.1
-0.1
mgl
MGL
-1.0
+0.1
-0.4
-1.0
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.4
+0.1
-1.1
-0.3
+0.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-1.3
-0.0
+0.3
-0.5
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.4
+0.0
-0.4
-0.7
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.2
+0.1
-0.4
-1.1
+0.0
nl-ccm
NL-CCM, start OD=0.1
-0.3
-0.2
-0.1
-0.8
-0.0
mgl
MGL
-0.2
+0.0
-1.2
-0.2
+0.2
nln
NLN
-0.7
+0.0
-0.3
-0.2
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.5
+0.2
-0.9
-0.3
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
+0.3
-0.6
-0.9
-0.1
mgl
MGL
+0.3
-0.1
-0.9
-0.1
-0.4
nl-ccm
NL-CCM, start OD=0.1
-1.5
+0.3
+0.1
+0.0
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.3
-0.1
-0.7
+0.2
+0.1
mgl
MGL
+0.6
+0.3
-0.6
-1.3
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.2
+0.2
-0.6
-0.4
-0.1
nln
NLN
-0.9
-0.0
-0.1
+0.4
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
+0.1
-0.3
-0.8
+0.2
nl-ccm_agar
NL-CCM_agar
+0.3
+0.2
-0.4
-0.6
-0.0
nl-ccm_agar
NL-CCM_agar
-0.5
-0.1
+0.4
-0.1
-0.3
nf
NF
-0.0
+0.0
-0.9
+0.5
+0.0
nf
NF
-0.3
+0.6
-0.5
-0.2
+0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.9
-0.0
+0.3
+0.3
-0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.4
+0.1
+0.6
-0.2
-0.2
nln
NLN
+0.4
-0.1
-0.7
+0.5
+0.0
nf
NF
-0.1
+0.1
-0.3
+0.8
+0.1
nf_with_fulln
NF_with_fullN
+0.8
-0.0
+0.2
-0.1
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.6
+0.2
+0.5
-0.1
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
-0.0
+1.2
+1.0
-0.2
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