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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_02300 and MPMX19_02301 are separated by 45 nucleotides
MPMX19_02301 and MPMX19_02302 are separated by 182 nucleotides
MPMX19_02302 and MPMX19_02303 are separated by 30 nucleotides
MPMX19_02303 and MPMX19_02304 are separated by 173 nucleotides
MPMX19_02300: MPMX19_02300 - Transcription elongation factor GreA, at 2,422,627 to 2,423,100
_02300
MPMX19_02301: MPMX19_02301 - hypothetical protein, at 2,423,146 to 2,424,093
_02301
MPMX19_02302: MPMX19_02302 - putative chromate transport protein, at 2,424,276 to 2,425,595
_02302
MPMX19_02303: MPMX19_02303 - hypothetical protein, at 2,425,626 to 2,426,192
_02303
MPMX19_02304: MPMX19_02304 - hypothetical protein, at 2,426,366 to 2,427,358
_02304
Group
Condition
MPMX19
_02300
MPMX19
_02301
MPMX19
_02302
MPMX19
_02303
MPMX19
_02304
mgl
MGL
-0.8
+0.4
-0.0
-2.4
N.D.
nl-ccm_agar
NL-CCM_agar
-1.2
+0.1
-0.1
-1.5
N.D.
nl-ccm_agar
NL-CCM_agar
-0.8
-0.0
-0.1
-1.6
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.5
+0.1
+0.0
-2.1
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
-0.2
+0.1
-2.1
N.D.
mgl
MGL
-0.3
+0.0
-0.1
-1.7
N.D.
nl-ccm_agar
NL-CCM_agar
-0.6
+0.1
+0.0
-1.7
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.9
-0.1
+0.0
-1.2
N.D.
mgl
MGL
-0.7
-0.1
-0.1
-1.2
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
-0.9
+0.0
-0.9
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.4
+0.1
-0.0
-1.7
N.D.
nl-ccm_agar
NL-CCM_agar
-0.8
+0.0
-0.0
-1.1
N.D.
nl-ccm
NL-CCM, start OD=0.1
-0.0
-0.1
+0.1
-1.8
N.D.
nln
NLN
-0.3
+0.1
+0.0
-1.7
N.D.
mgl
MGL
-0.2
+0.1
-0.3
-1.3
N.D.
nl-ccm
NL-CCM, start OD=0.1
-0.3
+0.2
-0.0
-1.7
N.D.
nl-ccm
NL-CCM, start OD=0.3
-0.5
+0.1
-0.0
-1.4
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.0
-0.0
-0.0
-1.7
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.9
+0.1
-0.1
-0.8
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.4
+0.1
+0.0
-1.4
N.D.
nl-ccm_agar
NL-CCM_agar
-0.8
-0.1
-0.2
-0.6
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.5
+0.3
+0.0
-1.5
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.3
-0.1
+0.0
-1.2
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.0
-0.0
-0.1
-1.4
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
-0.1
-0.1
-1.5
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.2
+0.2
-0.1
-1.8
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
+0.1
+0.0
-1.4
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.7
+0.2
+0.1
-0.7
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.8
-0.2
-0.0
+0.7
N.D.
nf_with_fulln
NF_with_fullN
+0.9
-0.1
+0.2
+0.6
N.D.
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