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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_02262 and MPMX19_02263 are separated by 84 nucleotides
MPMX19_02263 and MPMX19_02264 overlap by 4 nucleotides
MPMX19_02264 and MPMX19_02265 are separated by 863 nucleotides
MPMX19_02265 and MPMX19_02266 are separated by 237 nucleotides
MPMX19_02262: MPMX19_02262 - IS66 family transposase ISAzs21, at 2,379,755 to 2,381,401
_02262
MPMX19_02263: MPMX19_02263 - hypothetical protein, at 2,381,486 to 2,381,833
_02263
MPMX19_02264: MPMX19_02264 - hypothetical protein, at 2,381,830 to 2,382,240
_02264
MPMX19_02265: MPMX19_02265 - Sporulation initiation inhibitor protein Soj, at 2,383,104 to 2,384,054
_02265
MPMX19_02266: MPMX19_02266 - hypothetical protein, at 2,384,292 to 2,384,546
_02266
Group
Condition
MPMX19
_02262
MPMX19
_02263
MPMX19
_02264
MPMX19
_02265
MPMX19
_02266
nf_with_fulln
NF_with_fullN
-0.2
-0.2
-0.4
-0.3
-0.3
nf_with_fulln
NF_with_fullN
-0.2
-0.2
-0.5
+0.0
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
-0.2
-0.4
-0.3
-0.1
nf
NF
+0.0
-0.3
-0.3
-0.2
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.0
-0.0
-0.1
-0.3
-0.4
nf_with_fulln
NF_with_fullN
-0.2
-0.0
-0.2
-0.3
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.4
+0.2
+0.7
-1.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.7
+0.2
+0.4
-0.5
nl-ccm_agar
NL-CCM_agar
+0.1
+0.0
-0.5
-0.2
-0.1
nf_with_fulln
NF_with_fullN
-0.0
+0.0
-0.6
-0.2
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
+0.1
-0.0
-0.2
-0.7
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.0
+0.1
-0.4
-0.0
-0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.0
+0.3
-0.6
-0.4
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
+0.1
-0.1
+0.0
-0.6
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.0
+0.2
-0.2
+0.1
-0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.2
+0.1
-0.1
-0.2
-0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.2
-0.1
-0.1
+0.2
-0.4
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
-0.4
-0.3
+1.0
-0.4
nf
NF
+0.0
+0.0
-0.3
-0.2
+0.4
nf
NF
+0.1
-0.1
-0.4
+0.1
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.3
+0.4
+0.9
-0.5
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
+0.1
+0.1
-0.4
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
+0.1
-0.1
+0.9
-0.4
nl-ccm
NL-CCM, start OD=0.3
+0.1
-0.1
-0.2
+0.2
+0.3
mgl
MGL
+0.1
+0.4
-0.1
-0.4
+0.4
mgl
MGL
+0.3
-0.4
-0.0
-0.0
+0.6
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
+0.1
-0.3
+0.2
+0.4
mgl
MGL
+0.2
+0.3
-0.3
+0.2
+0.2
mgl
MGL
+0.4
+0.2
-0.3
+0.4
+0.2
mgl
MGL
+0.2
+0.1
+0.5
+0.4
+0.3
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