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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_02222 and MPMX19_02223 are separated by 176 nucleotides
MPMX19_02223 and MPMX19_02224 are separated by 672 nucleotides
MPMX19_02224 and MPMX19_02225 are separated by 140 nucleotides
MPMX19_02225 and MPMX19_02226 are separated by 33 nucleotides
MPMX19_02222: MPMX19_02222 - hypothetical protein, at 2,328,822 to 2,329,679
_02222
MPMX19_02223: MPMX19_02223 - Ammonia channel, at 2,329,856 to 2,331,298
_02223
MPMX19_02224: MPMX19_02224 - Glucose-1-phosphate adenylyltransferase, at 2,331,971 to 2,333,242
_02224
MPMX19_02225: MPMX19_02225 - Glycogen synthase, at 2,333,383 to 2,334,849
_02225
MPMX19_02226: MPMX19_02226 - hypothetical protein, at 2,334,883 to 2,337,639
_02226
Group
Condition
MPMX19
_02222
MPMX19
_02223
MPMX19
_02224
MPMX19
_02225
MPMX19
_02226
nl-ccm_agar
NL-CCM_agar
-0.2
-0.9
-0.0
N.D.
+0.1
nl-ccm_agar
NL-CCM_agar
-0.3
-0.8
-0.1
N.D.
+0.1
nl-ccm_agar
NL-CCM_agar
-0.2
-0.7
-0.0
N.D.
+0.1
nl-ccm_agar
NL-CCM_agar
-0.1
-0.8
-0.1
N.D.
+0.1
nl-ccm_agar
NL-CCM_agar
-0.1
-0.7
-0.1
N.D.
+0.1
nl-ccm_agar
NL-CCM_agar
-0.0
-0.8
-0.0
N.D.
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.0
-0.3
-0.3
N.D.
-0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
-0.2
-0.4
N.D.
+0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
-0.3
-0.2
N.D.
+0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.3
-0.3
-0.1
N.D.
+0.1
nln
NLN
-0.2
-0.3
-0.2
N.D.
-0.0
mgl
MGL
-0.4
-0.3
+0.0
N.D.
+0.1
nln
NLN
-0.1
-0.2
-0.2
N.D.
-0.1
nln
NLN
-0.1
-0.2
-0.2
N.D.
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.2
-0.2
-0.2
N.D.
+0.1
nf
NF
-0.1
-0.2
-0.2
N.D.
-0.1
nl-ccm
NL-CCM, start OD=0.1
+0.0
-0.3
-0.3
N.D.
+0.1
mgl
MGL
-0.4
-0.3
+0.1
N.D.
+0.2
mgl
MGL
-0.3
-0.1
-0.2
N.D.
+0.1
nl-ccm
NL-CCM, start OD=0.3
-0.0
-0.2
-0.3
N.D.
+0.1
nf_with_fulln
NF_with_fullN
+0.0
-0.0
+0.3
N.D.
-0.2
nf_with_fulln
NF_with_fullN
+0.1
-0.0
+0.3
N.D.
-0.2
nf_with_fulln
NF_with_fullN
+0.1
+0.0
+0.3
N.D.
-0.2
nf_with_fulln
NF_with_fullN
+0.1
+0.1
+0.3
N.D.
-0.2
nf_with_fulln
NF_with_fullN
+0.1
+0.1
+0.4
N.D.
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.3
+0.6
N.D.
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
-0.2
+0.5
N.D.
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
+0.0
+0.6
N.D.
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
-0.2
+0.5
N.D.
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
+0.1
+0.6
N.D.
+0.3
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