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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_02192 and MPMX19_02193 are separated by 352 nucleotides
MPMX19_02193 and MPMX19_02194 are separated by 3 nucleotides
MPMX19_02194 and MPMX19_02195 are separated by 61 nucleotides
MPMX19_02195 and MPMX19_02196 are separated by 10 nucleotides
MPMX19_02192: MPMX19_02192 - hypothetical protein, at 2,294,759 to 2,295,937
_02192
MPMX19_02193: MPMX19_02193 - Holliday junction ATP-dependent DNA helicase RuvB, at 2,296,290 to 2,298,152
_02193
MPMX19_02194: MPMX19_02194 - Nucleoid-associated protein YbaB, at 2,298,156 to 2,298,479
_02194
MPMX19_02195: MPMX19_02195 - Recombination protein RecR, at 2,298,541 to 2,299,134
_02195
MPMX19_02196: MPMX19_02196 - 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD, at 2,299,145 to 2,300,476
_02196
Group
Condition
MPMX19
_02192
MPMX19
_02193
MPMX19
_02194
MPMX19
_02195
MPMX19
_02196
mgl
MGL
-0.7
N.D.
N.D.
-1.3
+0.2
mgl
MGL
-0.2
N.D.
N.D.
-1.3
-0.2
mgl
MGL
-0.2
N.D.
N.D.
-0.8
-0.4
mgl
MGL
-0.2
N.D.
N.D.
-0.8
-0.3
mgl
MGL
-0.2
N.D.
N.D.
-0.8
-0.2
mgl
MGL
+0.2
N.D.
N.D.
-0.9
-0.4
nl-ccm_agar
NL-CCM_agar
-0.1
N.D.
N.D.
-0.7
-0.2
nl-ccm_agar
NL-CCM_agar
-0.1
N.D.
N.D.
-0.9
+0.0
nl-ccm_agar
NL-CCM_agar
+0.0
N.D.
N.D.
-0.7
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
N.D.
N.D.
-0.5
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.0
N.D.
N.D.
-0.6
-0.1
nln
NLN
+0.1
N.D.
N.D.
-0.7
-0.1
nln
NLN
+0.1
N.D.
N.D.
-0.6
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
N.D.
N.D.
-0.8
+0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.0
N.D.
N.D.
-0.5
-0.1
nl-ccm_agar
NL-CCM_agar
-0.2
N.D.
N.D.
-0.4
+0.0
nl-ccm
NL-CCM, start OD=0.1
+0.0
N.D.
N.D.
-0.5
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
N.D.
N.D.
-0.4
-0.1
nl-ccm_agar
NL-CCM_agar
+0.0
N.D.
N.D.
-0.4
-0.1
nln
NLN
+0.1
N.D.
N.D.
-0.6
+0.0
nln
NLN
+0.0
N.D.
N.D.
-0.5
+0.1
nl-ccm_agar
NL-CCM_agar
-0.0
N.D.
N.D.
-0.5
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.0
N.D.
N.D.
-0.4
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.0
N.D.
N.D.
-0.4
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
N.D.
N.D.
-0.4
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
N.D.
N.D.
+0.2
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.2
N.D.
N.D.
-0.3
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
N.D.
N.D.
+0.3
-0.4
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
N.D.
N.D.
+0.3
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
N.D.
N.D.
+0.2
+0.1
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