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Gene
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Cofit
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_02144 and MPMX19_02145 are separated by 401 nucleotides
MPMX19_02145 and MPMX19_02146 are separated by 102 nucleotides
MPMX19_02146 and MPMX19_02147 are separated by 186 nucleotides
MPMX19_02147 and MPMX19_02148 overlap by 4 nucleotides
MPMX19_02144: MPMX19_02144 - hypothetical protein, at 2,242,739 to 2,243,059
_02144
MPMX19_02145: MPMX19_02145 - hypothetical protein, at 2,243,461 to 2,244,174
_02145
MPMX19_02146: MPMX19_02146 - tRNA-Leu, at 2,244,277 to 2,244,361
_02146
MPMX19_02147: MPMX19_02147 - Octanoyltransferase, at 2,244,548 to 2,245,282
_02147
MPMX19_02148: MPMX19_02148 - hypothetical protein, at 2,245,279 to 2,245,791
_02148
Group
Condition
MPMX19
_02144
MPMX19
_02145
MPMX19
_02146
MPMX19
_02147
MPMX19
_02148
mgl
MGL
-0.4
-0.2
N.D.
N.D.
-0.5
mgl
MGL
-0.1
-0.3
N.D.
N.D.
-0.4
mgl
MGL
-0.4
-0.1
N.D.
N.D.
-0.1
nf_with_fulln
NF_with_fullN
-0.3
-0.2
N.D.
N.D.
-0.2
nl-ccm_agar
NL-CCM_agar
-0.1
-0.1
N.D.
N.D.
-0.4
nln
NLN
-0.2
-0.1
N.D.
N.D.
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
-0.2
N.D.
N.D.
-0.2
nf_with_fulln
NF_with_fullN
-0.2
+0.0
N.D.
N.D.
-0.4
nl-ccm_agar
NL-CCM_agar
-0.1
+0.0
N.D.
N.D.
-0.4
mgl
MGL
-0.4
+0.1
N.D.
N.D.
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
+0.0
N.D.
N.D.
-0.3
nl-ccm_agar
NL-CCM_agar
+0.2
-0.0
N.D.
N.D.
-0.5
mgl
MGL
-0.3
+0.2
N.D.
N.D.
-0.2
nln
NLN
-0.1
+0.1
N.D.
N.D.
-0.3
nl-ccm_agar
NL-CCM_agar
-0.1
+0.2
N.D.
N.D.
-0.3
nl-ccm
NL-CCM, start OD=0.1
-0.3
+0.0
N.D.
N.D.
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.1
N.D.
N.D.
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
+0.0
N.D.
N.D.
-0.4
nf
NF
-0.1
+0.2
N.D.
N.D.
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
+0.0
N.D.
N.D.
-0.4
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
+0.3
N.D.
N.D.
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
-0.2
N.D.
N.D.
+0.1
nl-ccm_agar
NL-CCM_agar
+0.2
+0.1
N.D.
N.D.
-0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.0
+0.1
N.D.
N.D.
+0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.2
+0.1
N.D.
N.D.
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
+0.1
N.D.
N.D.
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.3
-0.0
N.D.
N.D.
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.0
+0.1
N.D.
N.D.
+0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
+0.1
N.D.
N.D.
+0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.0
+0.2
N.D.
N.D.
+0.3
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