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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_02115 and MPMX19_02116 are separated by 140 nucleotides
MPMX19_02116 and MPMX19_02117 are separated by 198 nucleotides
MPMX19_02117 and MPMX19_02118 are separated by 69 nucleotides
MPMX19_02118 and MPMX19_02119 are separated by 130 nucleotides
MPMX19_02115: MPMX19_02115 - hypothetical protein, at 2,214,750 to 2,215,163
_02115
MPMX19_02116: MPMX19_02116 - Cold shock protein CspA, at 2,215,304 to 2,215,513
_02116
MPMX19_02117: MPMX19_02117 - Bifunctional protein HldE, at 2,215,712 to 2,217,157
_02117
MPMX19_02118: MPMX19_02118 - hypothetical protein, at 2,217,227 to 2,217,541
_02118
MPMX19_02119: MPMX19_02119 - Adaptive-response sensory-kinase SasA, at 2,217,672 to 2,219,153
_02119
Group
Condition
MPMX19
_02115
MPMX19
_02116
MPMX19
_02117
MPMX19
_02118
MPMX19
_02119
nl-ccm_agar
NL-CCM_agar
-1.0
-1.3
N.D.
-1.0
-0.0
mgl
MGL
-0.1
-1.7
N.D.
-0.2
+0.0
mgl
MGL
-0.4
-0.6
N.D.
-1.2
+0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.5
-0.7
N.D.
-0.5
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
-1.3
N.D.
-0.5
+0.1
mgl
MGL
+0.3
-2.0
N.D.
+0.1
+0.2
nl-ccm
NL-CCM, start OD=0.3
-0.3
-1.0
N.D.
-0.3
+0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.7
-0.4
N.D.
-0.4
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.2
-0.8
N.D.
-0.6
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
-0.8
N.D.
-0.4
+0.1
nf_with_fulln
NF_with_fullN
-1.2
+0.8
N.D.
-0.4
+0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.2
-0.7
N.D.
-0.2
-0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.3
-0.5
N.D.
-0.6
+0.1
mgl
MGL
+0.8
+0.3
N.D.
-1.7
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
-0.9
N.D.
+0.4
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
-0.1
N.D.
-0.7
-0.1
nf
NF
+0.0
-0.8
N.D.
+0.4
+0.1
nln
NLN
-0.3
+0.5
N.D.
-0.5
-0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.7
+0.7
N.D.
-0.3
+0.1
mgl
MGL
+1.0
-0.5
N.D.
-0.8
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.3
+0.4
N.D.
-0.9
+0.2
nl-ccm
NL-CCM, start OD=0.3
-0.3
+0.6
N.D.
-0.4
+0.1
nf_with_fulln
NF_with_fullN
-0.7
+1.2
N.D.
-0.4
-0.0
nf_with_fulln
NF_with_fullN
-0.5
+1.0
N.D.
-0.0
+0.0
nln
NLN
+0.2
+1.0
N.D.
-0.4
-0.1
nln
NLN
-0.1
+1.0
N.D.
-0.2
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
+0.9
N.D.
-0.5
-0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.3
+0.8
N.D.
+0.1
+0.1
nf
NF
+0.2
+0.8
N.D.
+0.3
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
+1.2
N.D.
+0.5
+0.1
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