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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_02104 and MPMX19_02105 are separated by 383 nucleotides
MPMX19_02105 and MPMX19_02106 are separated by 110 nucleotides
MPMX19_02106 and MPMX19_02107 are separated by 201 nucleotides
MPMX19_02107 and MPMX19_02108 are separated by 105 nucleotides
MPMX19_02104: MPMX19_02104 - ATP synthase subunit delta, at 2,202,177 to 2,202,746
_02104
MPMX19_02105: MPMX19_02105 - hypothetical protein, at 2,203,130 to 2,203,525
_02105
MPMX19_02106: MPMX19_02106 - hypothetical protein, at 2,203,636 to 2,204,151
_02106
MPMX19_02107: MPMX19_02107 - Primosomal protein N', at 2,204,353 to 2,206,659
_02107
MPMX19_02108: MPMX19_02108 - Transaldolase, at 2,206,765 to 2,207,421
_02108
Group
Condition
MPMX19
_02104
MPMX19
_02105
MPMX19
_02106
MPMX19
_02107
MPMX19
_02108
nln
NLN
N.D.
-1.0
-0.1
N.D.
N.D.
nf
NF
N.D.
-0.9
+0.0
N.D.
N.D.
mgl
MGL
N.D.
-1.1
+0.3
N.D.
N.D.
nln
NLN
N.D.
-0.6
-0.1
N.D.
N.D.
mgl
MGL
N.D.
-0.9
+0.2
N.D.
N.D.
nln
NLN
N.D.
-0.7
-0.0
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
-0.8
+0.1
N.D.
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
-0.6
-0.1
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
-0.7
+0.1
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
-0.6
-0.1
N.D.
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-0.7
+0.0
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
-0.5
-0.1
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
-0.7
+0.1
N.D.
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-0.5
-0.1
N.D.
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
-0.6
+0.1
N.D.
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
-0.6
+0.1
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
-0.5
+0.1
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.2
-0.5
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.5
+0.2
N.D.
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
-0.4
+0.1
N.D.
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-0.4
+0.2
N.D.
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
-0.4
+0.3
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
-0.4
+0.4
N.D.
N.D.
nf_with_fulln
NF_with_fullN
N.D.
+0.4
-0.1
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.5
-0.1
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
+0.5
-0.1
N.D.
N.D.
nf_with_fulln
NF_with_fullN
N.D.
+0.4
+0.1
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.9
-0.3
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
+0.5
+0.1
N.D.
N.D.
nf_with_fulln
NF_with_fullN
N.D.
+0.3
+0.4
N.D.
N.D.
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