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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_02061 and MPMX19_02062 are separated by 139 nucleotides
MPMX19_02062 and MPMX19_02063 are separated by 51 nucleotides
MPMX19_02063 and MPMX19_02064 are separated by 12 nucleotides
MPMX19_02064 and MPMX19_02065 overlap by 4 nucleotides
MPMX19_02061: MPMX19_02061 - Sensor histidine kinase RcsC, at 2,155,185 to 2,157,770
_02061
MPMX19_02062: MPMX19_02062 - Maleylpyruvate isomerase, at 2,157,910 to 2,158,560
_02062
MPMX19_02063: MPMX19_02063 - High-affinity branched-chain amino acid transport ATP-binding protein LivF, at 2,158,612 to 2,159,316
_02063
MPMX19_02064: MPMX19_02064 - Lipopolysaccharide export system ATP-binding protein LptB, at 2,159,329 to 2,160,153
_02064
MPMX19_02065: MPMX19_02065 - hypothetical protein, at 2,160,150 to 2,161,097
_02065
Group
Condition
MPMX19
_02061
MPMX19
_02062
MPMX19
_02063
MPMX19
_02064
MPMX19
_02065
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.3
-0.8
-0.2
-0.4
nf_with_fulln
NF_with_fullN
-0.2
-0.4
-0.1
+0.1
-0.2
mgl
MGL
+0.2
-0.5
+0.3
-0.2
-0.3
mgl
MGL
+0.2
-0.1
-0.4
-0.2
+0.3
mgl
MGL
+0.2
-0.4
+0.5
-0.3
-0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.2
-0.3
+0.2
-0.0
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
-0.5
+0.2
+0.2
+0.0
mgl
MGL
+0.1
-1.1
+0.7
+0.3
+0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
-0.2
+0.4
-0.1
-0.2
nf
NF
-0.0
+0.3
+0.3
+0.1
-0.3
nl-ccm
NL-CCM, start OD=0.3
+0.2
-0.4
+0.5
-0.0
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
-0.1
+0.5
-0.1
+0.1
nln
NLN
+0.1
-0.2
+0.7
+0.0
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.3
+0.2
+0.2
+0.1
-0.2
nl-ccm_agar
NL-CCM_agar
+0.1
-0.2
+0.5
+0.2
-0.0
mgl
MGL
+0.1
+0.2
+0.5
-0.2
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.2
+0.3
+0.2
-0.1
+0.1
nl-ccm
NL-CCM, start OD=0.1
+0.1
-0.0
+0.3
+0.2
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.0
+0.2
+0.4
+0.1
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
-0.0
+0.2
+0.1
+0.3
nf
NF
+0.0
+0.4
+0.2
+0.2
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.2
+0.4
+0.4
-0.1
+0.0
nl-ccm
NL-CCM, start OD=0.3
+0.2
-0.2
+0.9
-0.0
+0.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
+0.2
+0.4
+0.1
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.2
+0.3
+0.5
+0.1
+0.1
nf
NF
+0.1
-0.2
+0.7
+0.3
+0.2
nln
NLN
+0.1
+0.2
+0.4
+0.3
+0.2
nl-ccm
NL-CCM, start OD=0.1
+0.1
+0.3
+0.8
-0.0
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
+0.3
+0.6
+0.2
+0.3
nl-ccm_agar
NL-CCM_agar
+0.1
+0.4
+0.7
+0.2
+0.2
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