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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_02055 and MPMX19_02056 are separated by 32 nucleotides
MPMX19_02056 and MPMX19_02057 are separated by 17 nucleotides
MPMX19_02057 and MPMX19_02058 are separated by 174 nucleotides
MPMX19_02058 and MPMX19_02059 overlap by 11 nucleotides
MPMX19_02055: MPMX19_02055 - Hypoxic response protein 1, at 2,151,441 to 2,151,875
_02055
MPMX19_02056: MPMX19_02056 - hypothetical protein, at 2,151,908 to 2,152,174
_02056
MPMX19_02057: MPMX19_02057 - hypothetical protein, at 2,152,192 to 2,152,986
_02057
MPMX19_02058: MPMX19_02058 - hypothetical protein, at 2,153,161 to 2,153,397
_02058
MPMX19_02059: MPMX19_02059 - hypothetical protein, at 2,153,387 to 2,153,977
_02059
Group
Condition
MPMX19
_02055
MPMX19
_02056
MPMX19
_02057
MPMX19
_02058
MPMX19
_02059
mgl
MGL
-1.2
N.D.
-0.4
-0.0
N.D.
mgl
MGL
-0.8
N.D.
-0.1
-0.6
N.D.
mgl
MGL
-1.3
N.D.
+0.5
-0.5
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.0
N.D.
-0.5
-0.6
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.9
N.D.
-0.1
-0.1
N.D.
nl-ccm
NL-CCM, start OD=0.1
-0.2
N.D.
-1.1
+0.2
N.D.
nl-ccm
NL-CCM, start OD=0.1
-0.5
N.D.
-0.0
-0.4
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.3
N.D.
-0.2
-0.3
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.4
N.D.
-0.4
+0.1
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.2
N.D.
+0.2
-0.6
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.5
N.D.
+0.1
-0.3
N.D.
nl-ccm
NL-CCM, start OD=0.3
-0.6
N.D.
-0.2
+0.1
N.D.
nln
NLN
-0.3
N.D.
-0.4
+0.1
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.3
N.D.
+0.5
-0.7
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.5
N.D.
+0.1
-0.2
N.D.
mgl
MGL
-0.8
N.D.
+0.2
+0.2
N.D.
mgl
MGL
-1.0
N.D.
+0.5
+0.2
N.D.
mgl
MGL
-0.4
N.D.
+0.4
-0.2
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.2
N.D.
-0.3
+0.4
N.D.
nln
NLN
-0.3
N.D.
+0.4
-0.1
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.4
N.D.
+0.1
+0.3
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.5
N.D.
-0.1
-0.2
N.D.
nf_with_fulln
NF_with_fullN
+0.2
N.D.
+0.6
-0.2
N.D.
nln
NLN
+0.3
N.D.
+0.5
-0.2
N.D.
nln
NLN
-0.3
N.D.
+0.4
+0.6
N.D.
nf_with_fulln
NF_with_fullN
+0.3
N.D.
+0.5
+0.2
N.D.
nf_with_fulln
NF_with_fullN
+0.6
N.D.
+0.1
+0.6
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
N.D.
+0.7
+0.8
N.D.
nf_with_fulln
NF_with_fullN
+0.3
N.D.
+0.4
+1.2
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+1.0
N.D.
+0.3
+0.9
N.D.
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