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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_02033 and MPMX19_02034 are separated by 128 nucleotides
MPMX19_02034 and MPMX19_02035 are separated by 53 nucleotides
MPMX19_02035 and MPMX19_02036 are separated by 168 nucleotides
MPMX19_02036 and MPMX19_02037 overlap by 4 nucleotides
MPMX19_02033: MPMX19_02033 - hypothetical protein, at 2,127,510 to 2,127,974
_02033
MPMX19_02034: MPMX19_02034 - Peptidoglycan-associated lipoprotein, at 2,128,103 to 2,128,786
_02034
MPMX19_02035: MPMX19_02035 - C4-dicarboxylate-binding periplasmic protein DctP, at 2,128,840 to 2,129,877
_02035
MPMX19_02036: MPMX19_02036 - hypothetical protein, at 2,130,046 to 2,130,585
_02036
MPMX19_02037: MPMX19_02037 - hypothetical protein, at 2,130,582 to 2,131,076
_02037
Group
Condition
MPMX19
_02033
MPMX19
_02034
MPMX19
_02035
MPMX19
_02036
MPMX19
_02037
nf_with_fulln
NF_with_fullN
-0.2
-0.9
+0.1
N.D.
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.3
-0.3
-0.1
N.D.
-0.1
nln
NLN
-0.2
-0.4
-0.0
N.D.
+0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
-0.3
+0.1
N.D.
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.0
-0.5
+0.1
N.D.
+0.1
nf_with_fulln
NF_with_fullN
-0.1
-0.3
-0.1
N.D.
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.6
-0.2
+0.5
N.D.
+0.0
nln
NLN
-0.1
-0.4
+0.2
N.D.
+0.1
nf
NF
-0.1
-0.4
+0.2
N.D.
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.2
+0.3
-0.1
N.D.
-0.2
nln
NLN
+0.2
-0.4
+0.0
N.D.
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
+0.1
+0.2
N.D.
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.3
+0.2
-0.1
N.D.
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.3
+0.3
+0.0
N.D.
+0.0
mgl
MGL
-0.2
+0.3
+0.2
N.D.
-0.2
mgl
MGL
-0.1
+0.4
-0.3
N.D.
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
+0.4
+0.0
N.D.
-0.1
nf
NF
-0.1
+0.3
+0.2
N.D.
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
+0.4
-0.1
N.D.
-0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
+0.4
-0.1
N.D.
+0.1
nl-ccm_agar
NL-CCM_agar
+0.2
-0.1
+0.1
N.D.
+0.2
mgl
MGL
-0.2
+0.3
+0.3
N.D.
+0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
+0.5
-0.1
N.D.
+0.1
mgl
MGL
-0.0
+0.3
-0.1
N.D.
+0.2
nl-ccm
NL-CCM, start OD=0.1
-0.1
+0.3
+0.2
N.D.
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
+0.6
+0.1
N.D.
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.3
+0.3
+0.1
N.D.
+0.0
nl-ccm
NL-CCM, start OD=0.3
+0.2
+0.3
+0.1
N.D.
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
+0.5
+0.0
N.D.
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
+0.6
-0.0
N.D.
+0.1
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