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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_02029 and MPMX19_02030 overlap by 12 nucleotides
MPMX19_02030 and MPMX19_02031 are separated by 130 nucleotides
MPMX19_02031 and MPMX19_02032 are separated by 51 nucleotides
MPMX19_02032 and MPMX19_02033 are separated by 94 nucleotides
MPMX19_02029: MPMX19_02029 - Beta-barrel assembly-enhancing protease, at 2,123,116 to 2,124,606
_02029
MPMX19_02030: MPMX19_02030 - CO-responsive transcriptional regulator RcoM, at 2,124,595 to 2,125,326
_02030
MPMX19_02031: MPMX19_02031 - tRNA (cytidine/uridine/adenosine-2'-O-)-methyltransferase TrmJ, at 2,125,457 to 2,126,233
_02031
MPMX19_02032: MPMX19_02032 - UDP-3-O-acylglucosamine N-acyltransferase, at 2,126,285 to 2,127,415
_02032
MPMX19_02033: MPMX19_02033 - hypothetical protein, at 2,127,510 to 2,127,974
_02033
Group
Condition
MPMX19
_02029
MPMX19
_02030
MPMX19
_02031
MPMX19
_02032
MPMX19
_02033
mgl
MGL
-0.0
-0.8
-2.1
N.D.
-0.1
mgl
MGL
-0.3
-0.3
-1.8
N.D.
-0.1
mgl
MGL
+0.2
-0.7
-0.7
N.D.
-0.2
mgl
MGL
-0.2
-0.6
-0.4
N.D.
-0.2
nl-ccm
NL-CCM, start OD=0.1
-0.1
-0.2
-0.9
N.D.
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.0
-0.3
-1.1
N.D.
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.3
-0.1
-0.5
N.D.
-0.3
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.0
-0.3
-0.3
N.D.
-0.3
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.0
-0.2
-0.6
N.D.
-0.1
nl-ccm_agar
NL-CCM_agar
-0.0
-0.3
-0.5
N.D.
-0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.0
-0.2
-0.4
N.D.
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.0
-0.1
-0.5
N.D.
-0.3
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.4
-0.1
-0.3
N.D.
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
-0.4
-0.3
N.D.
+0.0
nln
NLN
+0.0
-0.0
-0.7
N.D.
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
+0.0
-0.8
N.D.
-0.1
nl-ccm_agar
NL-CCM_agar
+0.1
-0.2
-0.6
N.D.
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
+0.0
-0.4
N.D.
-0.6
mgl
MGL
-0.1
-0.9
+0.3
N.D.
+0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.0
-0.1
-0.6
N.D.
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
-0.1
+0.2
N.D.
-0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
-0.1
+0.3
N.D.
-0.3
nl-ccm_agar
NL-CCM_agar
+0.1
-0.5
+0.3
N.D.
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.3
+0.5
N.D.
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.0
-0.3
+0.8
N.D.
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
+0.4
+0.6
N.D.
-0.3
nl-ccm_agar
NL-CCM_agar
-0.0
-0.2
+0.8
N.D.
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
+0.2
+0.9
N.D.
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
-0.0
+0.6
N.D.
+0.3
nl-ccm
NL-CCM, start OD=0.1
-0.1
+0.2
+0.8
N.D.
+0.0
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