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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_02022 and MPMX19_02023 are separated by 241 nucleotides
MPMX19_02023 and MPMX19_02024 are separated by 47 nucleotides
MPMX19_02024 and MPMX19_02025 overlap by 4 nucleotides
MPMX19_02025 and MPMX19_02026 are separated by 8 nucleotides
MPMX19_02022: MPMX19_02022 - ECF RNA polymerase sigma factor RpoE, at 2,112,090 to 2,112,686
_02022
MPMX19_02023: MPMX19_02023 - hypothetical protein, at 2,112,928 to 2,114,916
_02023
MPMX19_02024: MPMX19_02024 - Molybdopterin molybdenumtransferase, at 2,114,964 to 2,116,136
_02024
MPMX19_02025: MPMX19_02025 - Protein-glutamate methylesterase/protein-glutamine glutaminase, at 2,116,133 to 2,117,050
_02025
MPMX19_02026: MPMX19_02026 - Sensor histidine kinase RcsC, at 2,117,059 to 2,120,916
_02026
Group
Condition
MPMX19
_02022
MPMX19
_02023
MPMX19
_02024
MPMX19
_02025
MPMX19
_02026
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.4
-0.1
-0.1
-0.3
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
-0.7
-0.1
+0.0
-0.1
+0.0
nln
NLN
-0.4
+0.0
-0.1
+0.1
+0.1
nf_with_fulln
NF_with_fullN
-0.1
+0.2
-0.0
-0.2
-0.1
mgl
MGL
-0.5
+0.2
-0.2
-0.0
+0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.4
-0.0
+0.3
+0.1
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
+0.3
-0.4
+0.2
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.3
+0.2
-0.1
-0.0
+0.2
nl-ccm_agar
NL-CCM_agar
-0.0
+0.2
-0.3
+0.1
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
-0.0
+0.2
+0.2
+0.1
nl-ccm_agar
NL-CCM_agar
-0.2
+0.1
+0.2
+0.1
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.2
+0.1
+0.1
+0.2
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
+0.1
+0.2
+0.0
+0.2
mgl
MGL
-0.2
+0.3
-0.2
+0.3
+0.3
nf
NF
+0.3
-0.1
+0.2
-0.1
+0.2
nln
NLN
-0.1
+0.2
+0.1
+0.1
+0.1
nln
NLN
+0.3
+0.1
+0.2
-0.1
+0.1
nl-ccm_agar
NL-CCM_agar
-0.2
+0.1
+0.4
+0.2
+0.1
nl-ccm_agar
NL-CCM_agar
+0.2
+0.2
+0.1
-0.0
+0.2
nl-ccm_agar
NL-CCM_agar
+0.4
-0.1
+0.1
+0.1
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.1
+0.2
+0.1
+0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.2
+0.0
+0.2
+0.1
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.2
+0.1
+0.2
+0.2
+0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
+0.1
+0.2
+0.3
+0.1
nl-ccm_agar
NL-CCM_agar
+0.0
+0.3
+0.1
+0.2
+0.2
mgl
MGL
+0.2
+0.2
-0.1
+0.4
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
+0.2
+0.3
+0.1
+0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.3
+0.2
+0.3
+0.2
+0.1
mgl
MGL
+0.2
+0.3
+0.3
+0.1
+0.3
mgl
MGL
+0.5
+0.3
+0.2
+0.2
+0.3
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