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Protein
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Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_02004 and MPMX19_02005 are separated by 6 nucleotides
MPMX19_02005 and MPMX19_02006 are separated by 5 nucleotides
MPMX19_02006 and MPMX19_02007 are separated by 47 nucleotides
MPMX19_02007 and MPMX19_02008 are separated by 141 nucleotides
MPMX19_02004: MPMX19_02004 - hypothetical protein, at 2,093,112 to 2,094,077
_02004
MPMX19_02005: MPMX19_02005 - tRNA pseudouridine synthase A, at 2,094,084 to 2,094,821
_02005
MPMX19_02006: MPMX19_02006 - Methionyl-tRNA formyltransferase, at 2,094,827 to 2,095,783
_02006
MPMX19_02007: MPMX19_02007 - Peptide deformylase 1, at 2,095,831 to 2,096,343
_02007
MPMX19_02008: MPMX19_02008 - Adenosylcobinamide-GDP ribazoletransferase, at 2,096,485 to 2,097,321
_02008
Group
Condition
MPMX19
_02004
MPMX19
_02005
MPMX19
_02006
MPMX19
_02007
MPMX19
_02008
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.5
N.D.
N.D.
N.D.
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.5
N.D.
N.D.
N.D.
N.D.
mgl
MGL
-0.4
N.D.
N.D.
N.D.
N.D.
nln
NLN
-0.3
N.D.
N.D.
N.D.
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.3
N.D.
N.D.
N.D.
N.D.
mgl
MGL
-0.3
N.D.
N.D.
N.D.
N.D.
nf_with_fulln
NF_with_fullN
-0.3
N.D.
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.2
N.D.
N.D.
N.D.
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
N.D.
N.D.
N.D.
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.2
N.D.
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.2
N.D.
N.D.
N.D.
N.D.
nl-ccm
NL-CCM, start OD=0.3
-0.2
N.D.
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.2
N.D.
N.D.
N.D.
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.2
N.D.
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
N.D.
N.D.
N.D.
N.D.
nf_with_fulln
NF_with_fullN
-0.2
N.D.
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.2
N.D.
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
N.D.
N.D.
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.2
N.D.
N.D.
N.D.
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
N.D.
N.D.
N.D.
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.2
N.D.
N.D.
N.D.
N.D.
nln
NLN
-0.1
N.D.
N.D.
N.D.
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
N.D.
N.D.
N.D.
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
N.D.
N.D.
N.D.
N.D.
nl-ccm_agar
NL-CCM_agar
-0.1
N.D.
N.D.
N.D.
N.D.
nln
NLN
-0.1
N.D.
N.D.
N.D.
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
N.D.
N.D.
N.D.
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
N.D.
N.D.
N.D.
N.D.
nln
NLN
+0.2
N.D.
N.D.
N.D.
N.D.
mgl
MGL
+0.4
N.D.
N.D.
N.D.
N.D.
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