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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_01985 and MPMX19_01986 are separated by 147 nucleotides
MPMX19_01986 and MPMX19_01987 overlap by 103 nucleotides
MPMX19_01987 and MPMX19_01988 are separated by 42 nucleotides
MPMX19_01988 and MPMX19_01989 are separated by 316 nucleotides
MPMX19_01985: MPMX19_01985 - Leucyl/phenylalanyl-tRNA--protein transferase, at 2,067,554 to 2,068,216
_01985
MPMX19_01986: MPMX19_01986 - hypothetical protein, at 2,068,364 to 2,069,950
_01986
MPMX19_01987: MPMX19_01987 - Anhydro-N-acetylmuramic acid kinase, at 2,069,848 to 2,070,957
_01987
MPMX19_01988: MPMX19_01988 - hypothetical protein, at 2,071,000 to 2,071,863
_01988
MPMX19_01989: MPMX19_01989 - Putative peroxiredoxin bcp, at 2,072,180 to 2,072,644
_01989
Group
Condition
MPMX19
_01985
MPMX19
_01986
MPMX19
_01987
MPMX19
_01988
MPMX19
_01989
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
-0.0
-1.5
-0.4
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
+0.1
-1.0
-0.2
-0.0
mgl
MGL
+0.1
-0.1
-0.5
-0.2
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.4
-0.0
-0.6
+0.1
+0.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.0
+0.1
-0.3
-0.3
-0.2
mgl
MGL
-0.5
+0.3
-0.6
+0.2
-0.2
nf
NF
-0.4
+0.1
-0.2
-0.1
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
+0.1
-0.4
-0.2
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.2
+0.1
-0.5
+0.1
-0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
+0.1
-0.6
+0.0
-0.2
mgl
MGL
+0.2
+0.0
-0.6
-0.0
-0.2
nl-ccm_agar
NL-CCM_agar
-0.5
+0.1
-0.1
+0.1
-0.2
nl-ccm_agar
NL-CCM_agar
+0.2
-0.0
-0.5
-0.1
-0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.2
+0.0
-0.3
-0.4
-0.1
nl-ccm
NL-CCM, start OD=0.3
-0.0
-0.0
-0.6
+0.1
+0.1
nln
NLN
-0.0
-0.0
-0.5
+0.2
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
+0.1
-0.4
+0.1
-0.1
nl-ccm_agar
NL-CCM_agar
-0.3
+0.1
+0.2
+0.0
-0.3
nl-ccm
NL-CCM, start OD=0.1
+0.2
-0.0
-0.5
+0.2
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.2
+0.2
-0.4
+0.1
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
+0.1
-0.2
+0.2
-0.1
mgl
MGL
+0.2
+0.2
-0.0
-0.4
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
+0.0
-0.4
+0.3
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
-0.0
-0.5
+0.4
+0.2
mgl
MGL
+0.3
+0.1
-0.1
+0.2
-0.2
mgl
MGL
-0.2
-0.2
+0.4
+0.4
-0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.2
+0.2
+0.1
+0.3
-0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
-0.1
+0.3
+0.1
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
-0.0
-0.6
+0.0
+0.4
nf_with_fulln
NF_with_fullN
-0.2
-0.1
+0.3
+0.2
+0.1
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