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Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_01972 and MPMX19_01973 are separated by 67 nucleotides
MPMX19_01973 and MPMX19_01974 are separated by 161 nucleotides
MPMX19_01974 and MPMX19_01975 are separated by 133 nucleotides
MPMX19_01975 and MPMX19_01976 are separated by 13 nucleotides
MPMX19_01972: MPMX19_01972 - hypothetical protein, at 2,054,296 to 2,055,732
_01972
MPMX19_01973: MPMX19_01973 - Beta-barrel assembly-enhancing protease, at 2,055,800 to 2,057,071
_01973
MPMX19_01974: MPMX19_01974 - hypothetical protein, at 2,057,233 to 2,058,663
_01974
MPMX19_01975: MPMX19_01975 - hypothetical protein, at 2,058,797 to 2,059,576
_01975
MPMX19_01976: MPMX19_01976 - Phosphoglycolate phosphatase, at 2,059,590 to 2,060,219
_01976
Group
Condition
MPMX19
_01972
MPMX19
_01973
MPMX19
_01974
MPMX19
_01975
MPMX19
_01976
nf_with_fulln
NF_with_fullN
-0.3
N.D.
-0.2
N.D.
-0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.2
N.D.
-0.2
N.D.
-0.4
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
N.D.
-0.2
N.D.
-0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.2
N.D.
-0.2
N.D.
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.3
N.D.
-0.0
N.D.
-0.2
mgl
MGL
-0.2
N.D.
-0.2
N.D.
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
N.D.
-0.1
N.D.
-0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.0
N.D.
-0.2
N.D.
-0.3
nf_with_fulln
NF_with_fullN
-0.1
N.D.
-0.3
N.D.
-0.0
mgl
MGL
+0.4
N.D.
-0.2
N.D.
-0.6
nln
NLN
-0.1
N.D.
-0.1
N.D.
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.0
N.D.
-0.1
N.D.
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
N.D.
-0.3
N.D.
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
N.D.
-0.0
N.D.
-0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
N.D.
+0.0
N.D.
-0.3
mgl
MGL
+0.1
N.D.
-0.1
N.D.
-0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
N.D.
+0.1
N.D.
-0.3
nl-ccm
NL-CCM, start OD=0.3
+0.2
N.D.
-0.0
N.D.
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
N.D.
+0.2
N.D.
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
N.D.
-0.1
N.D.
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
N.D.
-0.1
N.D.
-0.0
nf
NF
+0.1
N.D.
-0.2
N.D.
+0.1
nl-ccm
NL-CCM, start OD=0.1
+0.4
N.D.
-0.1
N.D.
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
N.D.
+0.1
N.D.
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.2
N.D.
-0.1
N.D.
+0.1
nl-ccm
NL-CCM, start OD=0.3
+0.3
N.D.
-0.1
N.D.
-0.0
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.2
N.D.
-0.2
N.D.
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.3
N.D.
+0.0
N.D.
-0.0
nl-ccm_agar
NL-CCM_agar
+0.2
N.D.
+0.1
N.D.
-0.1
mgl
MGL
+0.3
N.D.
+0.0
N.D.
+0.1
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