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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_01888 and MPMX19_01889 are separated by 28 nucleotides
MPMX19_01889 and MPMX19_01890 are separated by 180 nucleotides
MPMX19_01890 and MPMX19_01891 are separated by 136 nucleotides
MPMX19_01891 and MPMX19_01892 are separated by 147 nucleotides
MPMX19_01888: MPMX19_01888 - Cysteine--tRNA ligase, at 1,969,829 to 1,971,205
_01888
MPMX19_01889: MPMX19_01889 - Glutamate--tRNA ligase 1, at 1,971,234 to 1,972,589
_01889
MPMX19_01890: MPMX19_01890 - Glyoxalase ElbB, at 1,972,770 to 1,973,438
_01890
MPMX19_01891: MPMX19_01891 - hypothetical protein, at 1,973,575 to 1,974,144
_01891
MPMX19_01892: MPMX19_01892 - hypothetical protein, at 1,974,292 to 1,974,516
_01892
Group
Condition
MPMX19
_01888
MPMX19
_01889
MPMX19
_01890
MPMX19
_01891
MPMX19
_01892
mgl
MGL
N.D.
N.D.
-0.2
+0.1
-0.9
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
+0.0
-0.2
-0.6
mgl
MGL
N.D.
N.D.
+0.1
+0.0
-0.8
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
-0.1
-0.4
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
N.D.
-0.1
-0.1
-0.4
mgl
MGL
N.D.
N.D.
-0.1
+0.0
-0.5
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
N.D.
-0.0
-0.1
-0.4
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
N.D.
-0.0
-0.1
-0.5
mgl
MGL
N.D.
N.D.
-0.2
-0.2
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
+0.0
-0.5
-0.0
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
+0.0
+0.0
-0.5
mgl
MGL
N.D.
N.D.
-0.2
-0.3
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
N.D.
+0.2
-0.3
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
+0.1
-0.2
+0.2
nln
NLN
N.D.
N.D.
+0.1
-0.3
+0.2
nln
NLN
N.D.
N.D.
-0.3
+0.0
+0.3
nln
NLN
N.D.
N.D.
+0.3
-0.1
-0.2
nln
NLN
N.D.
N.D.
-0.3
+0.3
+0.2
nln
NLN
N.D.
N.D.
-0.2
+0.4
+0.1
nf_with_fulln
NF_with_fullN
N.D.
N.D.
+0.9
-0.0
-0.6
nf_with_fulln
NF_with_fullN
N.D.
N.D.
+0.7
+0.1
-0.0
nf_with_fulln
NF_with_fullN
N.D.
N.D.
+1.1
+0.2
+0.2
nf_with_fulln
NF_with_fullN
N.D.
N.D.
+1.2
-0.0
+0.2
nf_with_fulln
NF_with_fullN
N.D.
N.D.
+1.0
+0.0
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
+1.1
+0.1
+0.4
nf_with_fulln
NF_with_fullN
N.D.
N.D.
+1.1
+0.2
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
+0.9
+0.2
+0.6
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
+1.2
+0.4
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
+1.1
+0.1
+0.7
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
+1.2
+0.2
+0.6
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