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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_01842 and MPMX19_01843 are separated by 49 nucleotides
MPMX19_01843 and MPMX19_01844 are separated by 52 nucleotides
MPMX19_01844 and MPMX19_01845 overlap by 4 nucleotides
MPMX19_01845 and MPMX19_01846 are separated by 30 nucleotides
MPMX19_01842: MPMX19_01842 - FeMo cofactor biosynthesis protein NifB, at 1,923,493 to 1,925,055
_01842
MPMX19_01843: MPMX19_01843 - Ferredoxin-1, at 1,925,105 to 1,925,296
_01843
MPMX19_01844: MPMX19_01844 - hypothetical protein, at 1,925,349 to 1,925,876
_01844
MPMX19_01845: MPMX19_01845 - hypothetical protein, at 1,925,873 to 1,926,697
_01845
MPMX19_01846: MPMX19_01846 - hypothetical protein, at 1,926,728 to 1,927,054
_01846
Group
Condition
MPMX19
_01842
MPMX19
_01843
MPMX19
_01844
MPMX19
_01845
MPMX19
_01846
nl-ccm_agar
NL-CCM_agar
-0.4
-0.3
-0.2
-0.4
-0.4
nl-ccm_agar
NL-CCM_agar
-0.2
-0.3
-0.1
-0.2
-0.4
mgl
MGL
-0.1
-0.2
-0.2
-0.4
-0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
-0.0
-0.0
-0.5
-0.5
nl-ccm_agar
NL-CCM_agar
-0.2
-0.2
-0.2
-0.1
-0.4
nl-ccm_agar
NL-CCM_agar
-0.1
-0.1
-0.2
-0.4
-0.3
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
-0.2
-0.2
-0.3
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
+0.1
-0.1
-0.7
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.2
-0.0
-0.0
-0.5
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
-0.1
-0.1
-0.4
-0.1
nl-ccm_agar
NL-CCM_agar
-0.1
-0.3
-0.1
-0.2
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
-0.0
-0.0
-0.6
-0.0
nl-ccm_agar
NL-CCM_agar
-0.2
-0.3
-0.2
-0.1
+0.1
mgl
MGL
+0.2
-0.3
-0.2
-0.2
-0.3
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.0
+0.1
-0.1
-0.3
-0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.0
+0.1
-0.3
-0.4
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
-0.2
-0.1
-0.3
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
-0.0
-0.1
-0.5
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.0
+0.1
-0.1
-0.4
-0.2
mgl
MGL
+0.0
-0.0
-0.2
-0.4
+0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.1
+0.2
-0.2
-0.2
-0.2
mgl
MGL
+0.3
-0.0
-0.4
+0.1
-0.2
nf_with_fulln
NF_with_fullN
-0.2
+0.2
+0.2
-0.1
-0.4
nf
NF
-0.0
+0.1
+0.1
+0.1
-0.5
nf_with_fulln
NF_with_fullN
-0.3
+0.1
+0.3
+0.1
-0.3
nl-ccm
NL-CCM, start OD=0.3
-0.0
+0.0
+0.1
+0.2
-0.4
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-0.2
+0.1
+0.6
-0.1
nf_with_fulln
NF_with_fullN
-0.1
+0.4
+0.2
+0.1
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.2
+0.4
+0.1
+0.2
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
-0.0
+0.4
+0.5
-0.4
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