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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_01816 and MPMX19_01817 are separated by 70 nucleotides
MPMX19_01817 and MPMX19_01818 are separated by 364 nucleotides
MPMX19_01818 and MPMX19_01819 are separated by 123 nucleotides
MPMX19_01819 and MPMX19_01820 overlap by 4 nucleotides
MPMX19_01816: MPMX19_01816 - hypothetical protein, at 1,899,732 to 1,901,072
_01816
MPMX19_01817: MPMX19_01817 - hypothetical protein, at 1,901,143 to 1,901,334
_01817
MPMX19_01818: MPMX19_01818 - hypothetical protein, at 1,901,699 to 1,902,148
_01818
MPMX19_01819: MPMX19_01819 - Holin-like protein CidA, at 1,902,272 to 1,902,667
_01819
MPMX19_01820: MPMX19_01820 - Inner membrane protein YohK, at 1,902,664 to 1,903,386
_01820
Group
Condition
MPMX19
_01816
MPMX19
_01817
MPMX19
_01818
MPMX19
_01819
MPMX19
_01820
mgl
MGL
N.D.
N.D.
-0.7
-0.5
-0.0
mgl
MGL
N.D.
N.D.
-0.6
-0.2
-0.4
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
N.D.
-0.1
-0.6
-0.1
nl-ccm
NL-CCM, start OD=0.1
N.D.
N.D.
-0.4
-0.3
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
-0.1
-0.4
-0.2
nln
NLN
N.D.
N.D.
-0.2
-0.3
-0.1
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
-0.4
-0.2
-0.1
nf
NF
N.D.
N.D.
-0.4
-0.1
-0.1
mgl
MGL
N.D.
N.D.
-0.8
+0.1
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
-0.4
-0.0
-0.2
mgl
MGL
N.D.
N.D.
+0.2
-0.8
-0.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
N.D.
-0.4
-0.2
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
N.D.
+0.1
-0.5
-0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
N.D.
+0.0
-0.5
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
N.D.
-0.0
-0.6
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
-0.4
-0.3
+0.2
nln
NLN
N.D.
N.D.
+0.2
-0.4
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
-0.2
+0.1
-0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
N.D.
-0.2
+0.1
-0.4
nf_with_fulln
NF_with_fullN
N.D.
N.D.
-0.6
+0.1
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
N.D.
+0.2
-0.4
-0.1
nf_with_fulln
NF_with_fullN
N.D.
N.D.
-0.8
+0.4
+0.2
nf_with_fulln
NF_with_fullN
N.D.
N.D.
-0.4
+0.1
+0.1
nf_with_fulln
NF_with_fullN
N.D.
N.D.
-0.4
+0.0
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
N.D.
-0.3
+0.2
+0.2
nf_with_fulln
NF_with_fullN
N.D.
N.D.
-0.4
+0.4
+0.1
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
-0.2
+0.2
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
-0.0
+0.3
+0.3
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
+0.1
+0.2
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
+0.1
+0.6
+0.1
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