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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_01791 and MPMX19_01792 are separated by 72 nucleotides
MPMX19_01792 and MPMX19_01793 are separated by 391 nucleotides
MPMX19_01793 and MPMX19_01794 are separated by 116 nucleotides
MPMX19_01794 and MPMX19_01795 are separated by 132 nucleotides
MPMX19_01791: MPMX19_01791 - Urease accessory protein UreD, at 1,876,852 to 1,877,742
_01791
MPMX19_01792: MPMX19_01792 - Putative HTH-type transcriptional regulator YhjB, at 1,877,815 to 1,878,534
_01792
MPMX19_01793: MPMX19_01793 - Transcriptional regulatory protein DegU, at 1,878,926 to 1,879,594
_01793
MPMX19_01794: MPMX19_01794 - Putative cysteine protease YraA, at 1,879,711 to 1,880,283
_01794
MPMX19_01795: MPMX19_01795 - hypothetical protein, at 1,880,416 to 1,880,772
_01795
Group
Condition
MPMX19
_01791
MPMX19
_01792
MPMX19
_01793
MPMX19
_01794
MPMX19
_01795
mgl
MGL
+0.1
+0.3
-0.1
-0.4
-1.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.7
-0.4
-0.0
-0.1
+0.3
nln
NLN
+0.0
-0.2
-0.5
-0.4
+0.1
nf_with_fulln
NF_with_fullN
-0.2
-0.5
-0.6
+0.3
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.0
+0.1
-0.3
-0.6
-0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
-0.3
+0.2
-0.2
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
-0.2
-0.3
+0.2
-0.5
mgl
MGL
+0.3
+0.1
-0.4
-1.1
+0.3
nf
NF
+0.3
-0.1
-0.5
-0.4
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.0
-0.4
+0.3
-0.4
-0.2
nln
NLN
-0.1
+0.2
-0.3
-0.4
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
-0.4
-0.4
+0.2
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.3
+0.0
-0.2
-0.4
+0.1
nl-ccm
NL-CCM, start OD=0.1
-0.1
+0.2
+0.1
-0.7
+0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
+0.1
-0.3
+0.3
-0.3
nf_with_fulln
NF_with_fullN
-0.1
-0.5
-0.2
+0.5
+0.0
nl-ccm_agar
NL-CCM_agar
+0.2
+0.2
+0.1
-0.4
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
-0.3
+0.0
-0.7
+0.5
mgl
MGL
+0.0
-0.8
+0.3
+0.4
-0.0
nln
NLN
-0.1
-0.2
-0.5
+0.3
+0.3
nln
NLN
-0.0
-0.3
-0.3
+0.5
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.2
-0.3
-0.3
+0.4
-0.0
mgl
MGL
+0.4
-0.7
-0.2
+0.3
+0.2
nln
NLN
-0.1
-0.2
-0.4
+0.8
-0.0
nf_with_fulln
NF_with_fullN
-0.3
-0.3
-0.1
+0.9
+0.1
mgl
MGL
-0.5
+0.5
+0.5
+0.1
-0.3
nf_with_fulln
NF_with_fullN
+0.3
-0.3
-0.5
+0.4
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
-0.1
-0.3
+0.9
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
+0.0
+0.2
+0.6
+0.3
mgl
MGL
+0.3
+0.4
+0.5
+0.5
+0.0
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