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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_01788 and MPMX19_01789 are separated by 454 nucleotides
MPMX19_01789 and MPMX19_01790 are separated by 13 nucleotides
MPMX19_01790 and MPMX19_01791 are separated by 124 nucleotides
MPMX19_01791 and MPMX19_01792 are separated by 72 nucleotides
MPMX19_01788: MPMX19_01788 - tRNA-Gly, at 1,875,566 to 1,875,651
_01788
MPMX19_01789: MPMX19_01789 - Urease subunit beta, at 1,876,106 to 1,876,411
_01789
MPMX19_01790: MPMX19_01790 - Urease subunit gamma 1, at 1,876,425 to 1,876,727
_01790
MPMX19_01791: MPMX19_01791 - Urease accessory protein UreD, at 1,876,852 to 1,877,742
_01791
MPMX19_01792: MPMX19_01792 - Putative HTH-type transcriptional regulator YhjB, at 1,877,815 to 1,878,534
_01792
Group
Condition
MPMX19
_01788
MPMX19
_01789
MPMX19
_01790
MPMX19
_01791
MPMX19
_01792
nf
NF
N.D.
-0.8
-0.1
+0.3
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.3
+0.9
-0.7
-0.4
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
-0.3
+0.3
+0.0
-0.4
nl-ccm
NL-CCM, start OD=0.3
N.D.
-0.4
+0.3
-0.1
-0.1
nl-ccm_agar
NL-CCM_agar
N.D.
-0.7
+0.1
+0.1
+0.1
nf_with_fulln
NF_with_fullN
N.D.
-0.0
+0.3
-0.2
-0.5
mgl
MGL
N.D.
+0.6
+0.1
+0.0
-0.8
nln
NLN
N.D.
-0.2
+0.4
-0.0
-0.3
nf_with_fulln
NF_with_fullN
N.D.
+0.4
+0.1
-0.1
-0.5
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.3
-0.4
+0.4
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.2
-0.5
+0.5
+0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
+0.6
-0.1
+0.1
-0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-0.3
+0.3
+0.2
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.3
+0.1
+0.4
-0.3
nl-ccm_agar
NL-CCM_agar
N.D.
+0.3
-0.3
+0.2
+0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
+0.5
+0.2
-0.1
-0.2
nln
NLN
N.D.
+0.2
+0.5
+0.0
-0.3
nln
NLN
N.D.
+0.4
+0.3
-0.1
-0.2
mgl
MGL
N.D.
+0.5
-0.0
-0.5
+0.5
mgl
MGL
N.D.
+0.6
+0.4
+0.4
-0.7
nl-ccm
NL-CCM, start OD=0.1
N.D.
+0.2
+0.4
-0.1
+0.2
nln
NLN
N.D.
+0.6
+0.4
-0.1
-0.2
nl-ccm
NL-CCM, start OD=0.1
N.D.
+0.1
+0.6
+0.1
-0.1
mgl
MGL
N.D.
-0.1
+0.3
+0.3
+0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
+0.7
+0.2
+0.1
+0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
+0.5
+0.4
+0.1
+0.2
mgl
MGL
N.D.
+0.4
+0.3
+0.1
+0.3
nf_with_fulln
NF_with_fullN
N.D.
+0.7
+0.6
+0.3
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
+0.5
+0.5
+0.3
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
+0.8
+1.2
+0.4
-0.4
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