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Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_01774 and MPMX19_01775 are separated by 184 nucleotides
MPMX19_01775 and MPMX19_01776 are separated by 36 nucleotides
MPMX19_01776 and MPMX19_01777 are separated by 329 nucleotides
MPMX19_01777 and MPMX19_01778 are separated by 17 nucleotides
MPMX19_01774: MPMX19_01774 - Ketol-acid reductoisomerase (NADP(+)), at 1,861,131 to 1,862,150
_01774
MPMX19_01775: MPMX19_01775 - Acetolactate synthase isozyme 3 small subunit, at 1,862,335 to 1,862,841
_01775
MPMX19_01776: MPMX19_01776 - Acetolactate synthase isozyme 3 large subunit, at 1,862,878 to 1,864,641
_01776
MPMX19_01777: MPMX19_01777 - 2-aminoadipate transaminase, at 1,864,971 to 1,866,182
_01777
MPMX19_01778: MPMX19_01778 - tRNA dimethylallyltransferase, at 1,866,200 to 1,867,216
_01778
Group
Condition
MPMX19
_01774
MPMX19
_01775
MPMX19
_01776
MPMX19
_01777
MPMX19
_01778
nln
NLN
N.D.
N.D.
N.D.
-2.0
N.D.
nln
NLN
N.D.
N.D.
N.D.
-2.0
N.D.
nln
NLN
N.D.
N.D.
N.D.
-2.0
N.D.
nln
NLN
N.D.
N.D.
N.D.
-1.7
N.D.
nln
NLN
N.D.
N.D.
N.D.
-1.5
N.D.
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
N.D.
-1.2
N.D.
nln
NLN
N.D.
N.D.
N.D.
-1.2
N.D.
nln
NLN
N.D.
N.D.
N.D.
-1.2
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
N.D.
-1.1
N.D.
nln
NLN
N.D.
N.D.
N.D.
-1.1
N.D.
nln
NLN
N.D.
N.D.
N.D.
-1.1
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
N.D.
-1.1
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
-1.0
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
N.D.
N.D.
-1.0
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
-1.0
N.D.
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
N.D.
-1.0
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
N.D.
-1.0
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
N.D.
N.D.
-0.9
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
N.D.
N.D.
-0.9
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
N.D.
N.D.
-0.9
N.D.
nln
NLN
N.D.
N.D.
N.D.
-0.9
N.D.
nf_with_fulln
NF_with_fullN
N.D.
N.D.
N.D.
+1.0
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
N.D.
+1.0
N.D.
nf_with_fulln
NF_with_fullN
N.D.
N.D.
N.D.
+1.0
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
N.D.
+1.0
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
N.D.
+1.1
N.D.
nf_with_fulln
NF_with_fullN
N.D.
N.D.
N.D.
+1.2
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
N.D.
+1.2
N.D.
nf_with_fulln
NF_with_fullN
N.D.
N.D.
N.D.
+1.4
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
N.D.
+1.6
N.D.
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