Fitness for 5 genes in Azospirillum sp. SherDot2

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Top 30 experiments (either direction), sorted by average fitness

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500 ntMPMX19_01696 and MPMX19_01697 overlap by 4 nucleotidesMPMX19_01697 and MPMX19_01698 overlap by 8 nucleotidesMPMX19_01698 and MPMX19_01699 are separated by 56 nucleotidesMPMX19_01699 and MPMX19_01700 are separated by 1148 nucleotides MPMX19_01696: MPMX19_01696 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase, at 1,790,305 to 1,791,333 _01696 MPMX19_01697: MPMX19_01697 - Queuine tRNA-ribosyltransferase, at 1,791,330 to 1,792,598 _01697 MPMX19_01698: MPMX19_01698 - NADPH-dependent 7-cyano-7-deazaguanine reductase, at 1,792,591 to 1,793,055 _01698 MPMX19_01699: MPMX19_01699 - tRNA-Arg, at 1,793,112 to 1,793,197 _01699 MPMX19_01700: MPMX19_01700 - N-acetyltransferase Eis, at 1,794,346 to 1,795,455 _01700
Group Condition MPMX19_01696 MPMX19_01697 MPMX19_01698 MPMX19_01699 MPMX19_01700
nl-ccm_agar NL-CCM_agar -0.3 -0.1 -0.1 N.D. -0.1
nl-ccm; low oxygen NL-CCM; low oxygen -0.2 -0.2 -0.1 N.D. -0.1
nl-ccm; low oxygen NL-CCM; low oxygen -0.2 -0.1 -0.1 N.D. -0.1
nln NLN -0.2 -0.2 +0.1 N.D. -0.2
nl-ccm; high oxygen NL-CCM; high oxygen -0.2 -0.1 -0.2 N.D. +0.0
nl-ccm_agar NL-CCM_agar -0.4 -0.0 -0.1 N.D. +0.0
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum -0.6 +0.0 -0.1 N.D. +0.2
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum -0.3 -0.0 -0.2 N.D. +0.1
nl-ccm; low oxygen NL-CCM; low oxygen +0.0 -0.2 -0.4 N.D. +0.1
nln NLN -0.4 -0.0 +0.0 N.D. +0.1
nl-ccm; high oxygen NL-CCM; high oxygen -0.4 +0.0 -0.1 N.D. +0.1
nl-ccm; ambient oxygen NL-CCM; ambient oxygen +0.0 -0.1 -0.3 N.D. +0.1
mgl MGL -0.1 -0.3 +0.0 N.D. +0.1
nl-ccm; high oxygen NL-CCM; high oxygen +0.1 -0.1 -0.2 N.D. -0.0
nf_with_fulln NF_with_fullN -0.1 -0.1 +0.1 N.D. +0.1
nl-ccm_agar NL-CCM_agar -0.3 -0.1 +0.1 N.D. +0.1
nf NF +0.1 -0.3 +0.2 N.D. -0.1
mgl MGL -0.2 -0.0 +0.2 N.D. -0.1
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum -0.2 -0.1 +0.1 N.D. +0.1
nf NF -0.2 -0.0 +0.1 N.D. +0.1
nf_with10percent_fulln NF_with10percent_fullN +0.2 -0.1 -0.3 N.D. +0.1
nf_with10percent_fulln NF_with10percent_fullN +0.2 -0.1 +0.1 N.D. -0.3
nf_with10percent_fulln NF_with10percent_fullN -0.2 -0.1 +0.2 N.D. +0.1
nf_with_fulln NF_with_fullN -0.3 -0.0 +0.1 N.D. +0.2
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum +0.3 -0.1 +0.0 N.D. +0.0
mixed community NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum +0.1 +0.1 -0.1 N.D. +0.1
mixed community NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum +0.3 -0.1 -0.1 N.D. +0.1
nf_with10percent_fulln NF_with10percent_fullN +0.3 -0.2 +0.1 N.D. +0.1
mgl MGL -0.2 -0.0 +0.3 N.D. +0.4
mgl MGL +0.1 -0.0 +0.3 N.D. +0.2
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