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Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_01676 and MPMX19_01677 overlap by 4 nucleotides
MPMX19_01677 and MPMX19_01678 are separated by 14 nucleotides
MPMX19_01678 and MPMX19_01679 overlap by 4 nucleotides
MPMX19_01679 and MPMX19_01680 are separated by 7 nucleotides
MPMX19_01676: MPMX19_01676 - UDP-N-acetylmuramoylalanine--D-glutamate ligase, at 1,764,495 to 1,765,916
_01676
MPMX19_01677: MPMX19_01677 - putative peptidoglycan glycosyltransferase FtsW, at 1,765,913 to 1,767,034
_01677
MPMX19_01678: MPMX19_01678 - UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase, at 1,767,049 to 1,768,290
_01678
MPMX19_01679: MPMX19_01679 - hypothetical protein, at 1,768,287 to 1,768,538
_01679
MPMX19_01680: MPMX19_01680 - UDP-N-acetylmuramate--L-alanine ligase, at 1,768,546 to 1,769,964
_01680
Group
Condition
MPMX19
_01676
MPMX19
_01677
MPMX19
_01678
MPMX19
_01679
MPMX19
_01680
mgl
MGL
N.D.
N.D.
N.D.
-0.6
N.D.
nln
NLN
N.D.
N.D.
N.D.
-0.4
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
N.D.
N.D.
-0.4
N.D.
nl-ccm
NL-CCM, start OD=0.3
N.D.
N.D.
N.D.
-0.4
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
-0.3
N.D.
nl-ccm
NL-CCM, start OD=0.1
N.D.
N.D.
N.D.
-0.3
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
N.D.
-0.3
N.D.
nln
NLN
N.D.
N.D.
N.D.
-0.3
N.D.
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
N.D.
-0.2
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
N.D.
-0.2
N.D.
nf_with_fulln
NF_with_fullN
N.D.
N.D.
N.D.
+0.2
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
+0.2
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
N.D.
+0.2
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
N.D.
N.D.
+0.3
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
N.D.
N.D.
+0.3
N.D.
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
N.D.
+0.3
N.D.
nf_with_fulln
NF_with_fullN
N.D.
N.D.
N.D.
+0.3
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
N.D.
N.D.
+0.3
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
N.D.
N.D.
+0.3
N.D.
mgl
MGL
N.D.
N.D.
N.D.
+0.3
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
N.D.
+0.4
N.D.
mgl
MGL
N.D.
N.D.
N.D.
+0.4
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
N.D.
+0.4
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
N.D.
N.D.
+0.4
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
N.D.
N.D.
+0.5
N.D.
nf_with_fulln
NF_with_fullN
N.D.
N.D.
N.D.
+0.5
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
N.D.
+0.5
N.D.
nf_with_fulln
NF_with_fullN
N.D.
N.D.
N.D.
+0.5
N.D.
nf_with_fulln
NF_with_fullN
N.D.
N.D.
N.D.
+0.6
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
N.D.
+0.6
N.D.
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