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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_01664 and MPMX19_01665 are separated by 130 nucleotides
MPMX19_01665 and MPMX19_01666 are separated by 129 nucleotides
MPMX19_01666 and MPMX19_01667 overlap by 4 nucleotides
MPMX19_01667 and MPMX19_01668 are separated by 7 nucleotides
MPMX19_01664: MPMX19_01664 - Co-chaperone protein DjlA, at 1,749,488 to 1,750,270
_01664
MPMX19_01665: MPMX19_01665 - hypothetical protein, at 1,750,401 to 1,751,555
_01665
MPMX19_01666: MPMX19_01666 - ABC transporter ATP-binding protein uup, at 1,751,685 to 1,753,517
_01666
MPMX19_01667: MPMX19_01667 - putative amino-acid metabolite efflux pump, at 1,753,514 to 1,754,392
_01667
MPMX19_01668: MPMX19_01668 - N-acetylmuramoyl-L-alanine amidase AmiD, at 1,754,400 to 1,755,092
_01668
Group
Condition
MPMX19
_01664
MPMX19
_01665
MPMX19
_01666
MPMX19
_01667
MPMX19
_01668
nf_with_fulln
NF_with_fullN
-0.5
+0.1
+0.1
-0.2
N.D.
mgl
MGL
-0.7
+0.0
+0.0
+0.2
N.D.
mgl
MGL
-0.6
-0.2
+0.1
+0.3
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
-0.2
+0.0
+0.1
N.D.
nf_with_fulln
NF_with_fullN
-0.4
+0.2
+0.0
-0.0
N.D.
mgl
MGL
-0.5
+0.1
+0.1
+0.1
N.D.
nf_with_fulln
NF_with_fullN
-0.3
+0.2
+0.0
-0.1
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.8
-0.2
-0.3
-0.5
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.0
-0.1
-0.1
+0.2
N.D.
nf
NF
+0.2
-0.0
+0.1
-0.2
N.D.
nln
NLN
+0.1
+0.2
+0.1
-0.3
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.3
+0.1
-0.2
-0.2
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.2
+0.1
+0.1
+0.2
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.4
+0.0
-0.2
-0.1
N.D.
nf_with_fulln
NF_with_fullN
-0.1
+0.2
+0.1
-0.1
N.D.
mgl
MGL
-0.2
+0.0
+0.1
+0.2
N.D.
nln
NLN
-0.2
+0.0
+0.2
+0.1
N.D.
nf_with_fulln
NF_with_fullN
+0.0
+0.3
+0.2
-0.3
N.D.
nln
NLN
+0.1
+0.2
+0.1
-0.1
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
+0.1
-0.1
+0.4
N.D.
nln
NLN
+0.2
+0.1
+0.2
-0.1
N.D.
nln
NLN
-0.1
+0.0
+0.3
+0.2
N.D.
nl-ccm
NL-CCM, start OD=0.3
-0.2
+0.2
+0.2
+0.2
N.D.
nf
NF
+0.1
+0.1
+0.1
+0.2
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.7
+0.1
-0.1
-0.1
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
+0.3
-0.2
+0.0
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
+0.1
+0.2
+0.2
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.2
+0.2
+0.2
+0.2
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.2
+0.1
+0.2
+0.3
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.3
+0.2
+0.1
+0.3
N.D.
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