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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_01658 and MPMX19_01659 are separated by 168 nucleotides
MPMX19_01659 and MPMX19_01660 are separated by 114 nucleotides
MPMX19_01660 and MPMX19_01661 are separated by 254 nucleotides
MPMX19_01661 and MPMX19_01662 are separated by 47 nucleotides
MPMX19_01658: MPMX19_01658 - tRNA-specific 2-thiouridylase MnmA, at 1,740,076 to 1,741,263
_01658
MPMX19_01659: MPMX19_01659 - tRNA-Met, at 1,741,432 to 1,741,506
_01659
MPMX19_01660: MPMX19_01660 - Response regulator PleD, at 1,741,621 to 1,742,535
_01660
MPMX19_01661: MPMX19_01661 - Acetoin catabolism regulatory protein, at 1,742,790 to 1,744,736
_01661
MPMX19_01662: MPMX19_01662 - hypothetical protein, at 1,744,784 to 1,748,452
_01662
Group
Condition
MPMX19
_01658
MPMX19
_01659
MPMX19
_01660
MPMX19
_01661
MPMX19
_01662
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
N.D.
-0.1
+0.2
-0.1
mgl
MGL
N.D.
N.D.
+0.3
-0.2
-0.1
nln
NLN
N.D.
N.D.
-0.2
+0.1
+0.1
nl-ccm
NL-CCM, start OD=0.3
N.D.
N.D.
-0.1
+0.2
+0.1
nl-ccm
NL-CCM, start OD=0.3
N.D.
N.D.
-0.2
+0.1
+0.2
nf_with_fulln
NF_with_fullN
N.D.
N.D.
-0.0
-0.2
+0.3
mgl
MGL
N.D.
N.D.
-0.1
+0.3
+0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
-0.1
+0.1
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
N.D.
+0.2
+0.1
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
N.D.
+0.1
+0.2
-0.1
nf_with_fulln
NF_with_fullN
N.D.
N.D.
-0.0
-0.0
+0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
N.D.
+0.1
+0.3
-0.1
nln
NLN
N.D.
N.D.
+0.1
+0.1
+0.2
nf_with_fulln
NF_with_fullN
N.D.
N.D.
-0.0
+0.0
+0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
N.D.
+0.2
+0.1
+0.0
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
+0.1
+0.3
+0.0
nl-ccm
NL-CCM, start OD=0.1
N.D.
N.D.
+0.2
+0.1
+0.1
mgl
MGL
N.D.
N.D.
+0.4
+0.2
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
+0.1
-0.0
+0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
+0.2
+0.2
+0.0
mgl
MGL
N.D.
N.D.
+0.4
+0.1
-0.1
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
+0.3
+0.2
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
N.D.
+0.2
+0.1
+0.1
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
+0.2
+0.2
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
N.D.
+0.3
+0.1
+0.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
N.D.
+0.2
+0.1
+0.1
nf_with_fulln
NF_with_fullN
N.D.
N.D.
-0.2
+0.2
+0.4
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
N.D.
+0.3
+0.1
+0.1
nf_with_fulln
NF_with_fullN
N.D.
N.D.
+0.1
+0.1
+0.4
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
+0.2
+0.3
+0.1
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