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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_01643 and MPMX19_01644 overlap by 47 nucleotides
MPMX19_01644 and MPMX19_01645 are separated by 121 nucleotides
MPMX19_01645 and MPMX19_01646 are separated by 122 nucleotides
MPMX19_01646 and MPMX19_01647 are separated by 11 nucleotides
MPMX19_01643: MPMX19_01643 - hypothetical protein, at 1,728,823 to 1,729,734
_01643
MPMX19_01644: MPMX19_01644 - hypothetical protein, at 1,729,688 to 1,730,155
_01644
MPMX19_01645: MPMX19_01645 - HTH-type transcriptional regulator GltC, at 1,730,277 to 1,731,230
_01645
MPMX19_01646: MPMX19_01646 - L-lactate transporter, at 1,731,353 to 1,732,603
_01646
MPMX19_01647: MPMX19_01647 - hypothetical protein, at 1,732,615 to 1,733,034
_01647
Group
Condition
MPMX19
_01643
MPMX19
_01644
MPMX19
_01645
MPMX19
_01646
MPMX19
_01647
nf_with10percent_fulln
NF_with10percent_fullN
-0.8
-0.1
-1.0
-0.2
N.D.
nf_with_fulln
NF_with_fullN
-0.6
-0.2
-0.5
-0.1
N.D.
nf_with_fulln
NF_with_fullN
-0.4
-0.2
-0.4
-0.1
N.D.
mgl
MGL
+0.2
-0.3
-1.0
-0.0
N.D.
mgl
MGL
+0.5
-0.4
-1.2
-0.1
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.7
+0.1
-0.5
-0.0
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.3
+0.0
-1.0
+0.1
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.3
+0.1
-1.0
+0.0
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.3
-0.1
-0.6
+0.0
N.D.
nl-ccm
NL-CCM, start OD=0.1
+0.3
+0.1
-0.7
+0.1
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.3
+0.2
-0.6
+0.0
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
+0.3
-0.5
+0.1
N.D.
nl-ccm_agar
NL-CCM_agar
+0.4
+0.1
-0.5
+0.1
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.5
+0.3
-0.7
+0.2
N.D.
nln
NLN
+0.4
+0.3
-0.2
+0.1
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
-0.2
+0.8
+0.1
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.4
-0.1
+0.5
+0.0
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.4
-0.1
+0.5
+0.1
N.D.
mgl
MGL
+0.7
+0.3
-0.0
+0.0
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.3
+0.2
+0.4
+0.0
N.D.
nl-ccm
NL-CCM, start OD=0.3
+0.3
+0.3
+0.2
+0.1
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
+0.1
+0.6
+0.1
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.3
+0.1
+0.5
+0.1
N.D.
nl-ccm_agar
NL-CCM_agar
+0.5
+0.1
+0.4
+0.0
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.7
+0.1
+0.2
+0.1
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.3
+0.1
+0.7
+0.1
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.2
+0.2
+0.8
+0.0
N.D.
nln
NLN
+0.4
+0.3
+0.4
-0.0
N.D.
mgl
MGL
+0.2
+0.2
+1.0
+0.0
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.5
+0.4
+1.0
+0.0
N.D.
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