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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_01616 and MPMX19_01617 are separated by 9 nucleotides
MPMX19_01617 and MPMX19_01618 are separated by 282 nucleotides
MPMX19_01618 and MPMX19_01619 are separated by 36 nucleotides
MPMX19_01619 and MPMX19_01620 are separated by 36 nucleotides
MPMX19_01616: MPMX19_01616 - hypothetical protein, at 1,695,097 to 1,695,801
_01616
MPMX19_01617: MPMX19_01617 - hypothetical protein, at 1,695,811 to 1,697,028
_01617
MPMX19_01618: MPMX19_01618 - hypothetical protein, at 1,697,311 to 1,697,676
_01618
MPMX19_01619: MPMX19_01619 - DNA mismatch repair protein MutL, at 1,697,713 to 1,699,653
_01619
MPMX19_01620: MPMX19_01620 - hypothetical protein, at 1,699,690 to 1,699,926
_01620
Group
Condition
MPMX19
_01616
MPMX19
_01617
MPMX19
_01618
MPMX19
_01619
MPMX19
_01620
nf_with10percent_fulln
NF_with10percent_fullN
-0.5
-1.7
+0.0
+0.0
+0.1
mgl
MGL
-1.8
-0.7
+0.2
+0.0
+0.6
nl-ccm
NL-CCM, start OD=0.3
-1.5
-0.1
-0.1
+0.1
-0.0
nl-ccm_agar
NL-CCM_agar
-0.9
-0.5
+0.3
-0.1
-0.3
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-1.0
-0.3
-0.1
-0.2
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
-1.8
+0.0
+0.2
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.2
-1.0
+0.1
-0.1
-0.1
nf_with_fulln
NF_with_fullN
-0.8
-0.1
-0.1
-0.1
+0.2
mgl
MGL
-1.0
+0.3
-0.1
-0.1
-0.0
nln
NLN
+0.3
-0.5
-0.3
-0.1
-0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.8
-0.1
+0.5
-0.1
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.4
-0.6
+0.5
-0.1
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.7
-0.1
+0.4
-0.1
+0.1
nl-ccm_agar
NL-CCM_agar
-1.0
+0.3
+0.3
-0.2
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.5
+0.4
+0.3
-0.0
-0.5
nl-ccm; high oxygen
NL-CCM; high oxygen
-1.1
+0.6
+0.3
-0.1
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
+0.4
-0.1
-0.2
+0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.0
-0.6
+0.5
-0.1
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.5
+0.7
-0.0
-0.2
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
-0.6
+0.1
-0.0
+0.5
nf_with10percent_fulln
NF_with10percent_fullN
+0.6
-0.5
-0.1
+0.0
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.7
-0.5
+0.0
-0.1
+0.2
mgl
MGL
+0.4
+0.5
-0.3
-0.3
+0.1
nl-ccm
NL-CCM, start OD=0.1
-0.6
+0.8
+0.0
+0.1
-0.0
mgl
MGL
+0.8
-0.1
-0.2
-0.2
+0.0
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.4
+0.4
+0.4
+0.1
+0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.2
+0.5
+0.4
-0.1
-0.0
mgl
MGL
+0.6
+0.5
+0.0
-0.2
-0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.4
+0.5
+0.4
-0.1
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.6
+0.8
+0.0
-0.3
+0.2
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