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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_01595 and MPMX19_01596 overlap by 4 nucleotides
MPMX19_01596 and MPMX19_01597 are separated by 57 nucleotides
MPMX19_01597 and MPMX19_01598 are separated by 41 nucleotides
MPMX19_01598 and MPMX19_01599 are separated by 394 nucleotides
MPMX19_01595: MPMX19_01595 - Membrane-bound lytic murein transglycosylase A, at 1,670,412 to 1,671,590
_01595
MPMX19_01596: MPMX19_01596 - hypothetical protein, at 1,671,587 to 1,672,129
_01596
MPMX19_01597: MPMX19_01597 - 23S rRNA (uridine(2479)-2'-O)-methyltransferase, at 1,672,187 to 1,672,951
_01597
MPMX19_01598: MPMX19_01598 - hypothetical protein, at 1,672,993 to 1,675,542
_01598
MPMX19_01599: MPMX19_01599 - GDP-mannose pyrophosphatase NudK, at 1,675,937 to 1,676,551
_01599
Group
Condition
MPMX19
_01595
MPMX19
_01596
MPMX19
_01597
MPMX19
_01598
MPMX19
_01599
mgl
MGL
-0.1
+0.2
-2.5
-0.3
-0.1
mgl
MGL
-0.2
-0.7
-1.4
+0.1
-0.6
mgl
MGL
-0.1
-0.5
-1.8
+0.0
-0.2
mgl
MGL
-0.0
-0.3
-1.9
-0.0
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.1
+0.2
-1.9
+0.0
-0.5
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.0
-0.0
-1.9
-0.1
-0.2
nf_with_fulln
NF_with_fullN
+0.1
+0.1
-2.0
-0.1
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.0
+0.2
-2.0
+0.0
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.1
-0.4
-1.4
-0.1
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
+0.0
-1.3
-0.9
-0.0
+0.4
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.0
-0.6
-1.2
-0.0
-0.0
nl-ccm_agar
NL-CCM_agar
-0.0
-0.1
-1.1
-0.1
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.0
+0.3
-1.7
-0.0
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.0
+0.3
-1.7
+0.0
-0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
+0.0
+0.4
-1.8
+0.2
-0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.0
-0.1
-1.2
+0.0
+0.0
nf_with_fulln
NF_with_fullN
+0.1
-0.3
-0.8
+0.0
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.7
-0.5
-0.1
+0.3
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.0
+0.3
-1.5
+0.0
-0.0
nf
NF
+0.0
-0.2
-0.9
+0.0
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.1
+0.1
-1.1
-0.0
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.4
-0.6
-0.2
+0.2
nl-ccm_agar
NL-CCM_agar
+0.0
-0.1
-1.1
+0.0
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
+0.3
-1.1
-0.0
-0.1
mgl
MGL
-0.2
-0.1
-1.0
+0.1
+0.1
nl-ccm
NL-CCM, start OD=0.1
+0.1
+0.4
-1.5
+0.1
+0.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.0
+0.3
-0.6
-0.2
-0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
+0.2
-0.8
-0.0
-0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
+0.0
+0.4
-0.9
+0.1
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
+0.5
+0.5
+0.1
-0.3
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