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Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_01580 and MPMX19_01581 are separated by 145 nucleotides
MPMX19_01581 and MPMX19_01582 are separated by 23 nucleotides
MPMX19_01582 and MPMX19_01583 are separated by 106 nucleotides
MPMX19_01583 and MPMX19_01584 are separated by 77 nucleotides
MPMX19_01580: MPMX19_01580 - 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 1,652,218 to 1,653,051
_01580
MPMX19_01581: MPMX19_01581 - ATP-dependent RNA helicase DbpA, at 1,653,197 to 1,655,623
_01581
MPMX19_01582: MPMX19_01582 - Protein FeSII, at 1,655,647 to 1,656,030
_01582
MPMX19_01583: MPMX19_01583 - hypothetical protein, at 1,656,137 to 1,656,892
_01583
MPMX19_01584: MPMX19_01584 - Deoxyribodipyrimidine photo-lyase, at 1,656,970 to 1,658,442
_01584
Group
Condition
MPMX19
_01580
MPMX19
_01581
MPMX19
_01582
MPMX19
_01583
MPMX19
_01584
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
+0.0
-0.6
N.D.
-0.5
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
+0.0
+0.0
N.D.
-0.6
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
+0.0
-0.1
N.D.
-0.4
mgl
MGL
-0.0
+0.0
-0.6
N.D.
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.0
-0.0
-0.4
N.D.
-0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.2
+0.0
-0.1
N.D.
-0.3
nln
NLN
-0.3
+0.0
+0.1
N.D.
-0.4
nln
NLN
-0.3
+0.0
+0.0
N.D.
-0.3
nf_with_fulln
NF_with_fullN
-0.2
+0.1
-0.2
N.D.
-0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
-0.1
-0.2
N.D.
-0.2
nf_with_fulln
NF_with_fullN
-0.2
-0.1
+0.1
N.D.
-0.1
mgl
MGL
-0.3
-0.1
-0.1
N.D.
+0.1
nf
NF
-0.1
-0.0
+0.1
N.D.
-0.3
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
-0.1
-0.1
N.D.
-0.2
nln
NLN
-0.1
+0.0
+0.1
N.D.
-0.3
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
-0.1
+0.3
N.D.
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
+0.1
+0.1
-0.3
N.D.
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
-0.1
+0.1
N.D.
-0.3
mgl
MGL
-0.2
-0.0
+0.4
N.D.
-0.3
nln
NLN
-0.1
+0.1
+0.1
N.D.
-0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.3
+0.0
-0.2
N.D.
-0.2
nf_with_fulln
NF_with_fullN
-0.3
+0.2
+0.1
N.D.
-0.1
nf
NF
+0.2
-0.1
+0.1
N.D.
-0.2
nl-ccm_agar
NL-CCM_agar
+0.2
-0.0
+0.1
N.D.
-0.3
mgl
MGL
+0.3
+0.1
-0.3
N.D.
-0.1
mgl
MGL
-0.0
-0.1
+0.3
N.D.
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
-0.1
+0.1
N.D.
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.2
+0.1
-0.1
N.D.
-0.1
nl-ccm_agar
NL-CCM_agar
+0.2
-0.0
+0.2
N.D.
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.3
+0.0
+0.1
N.D.
-0.1
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