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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_01578 and MPMX19_01579 are separated by 240 nucleotides
MPMX19_01579 and MPMX19_01580 are separated by 220 nucleotides
MPMX19_01580 and MPMX19_01581 are separated by 145 nucleotides
MPMX19_01581 and MPMX19_01582 are separated by 23 nucleotides
MPMX19_01578: MPMX19_01578 - Peptide deformylase, at 1,651,017 to 1,651,553
_01578
MPMX19_01579: MPMX19_01579 - 30S ribosomal protein S21, at 1,651,794 to 1,651,997
_01579
MPMX19_01580: MPMX19_01580 - 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 1,652,218 to 1,653,051
_01580
MPMX19_01581: MPMX19_01581 - ATP-dependent RNA helicase DbpA, at 1,653,197 to 1,655,623
_01581
MPMX19_01582: MPMX19_01582 - Protein FeSII, at 1,655,647 to 1,656,030
_01582
Group
Condition
MPMX19
_01578
MPMX19
_01579
MPMX19
_01580
MPMX19
_01581
MPMX19
_01582
nf_with10percent_fulln
NF_with10percent_fullN
-0.0
N.D.
-0.4
+0.0
-0.6
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.5
N.D.
-0.2
-0.1
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.3
N.D.
-0.2
+0.0
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
N.D.
-0.4
+0.0
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.4
N.D.
-0.1
-0.1
+0.0
mgl
MGL
+0.0
N.D.
-0.3
-0.1
-0.1
nln
NLN
-0.2
N.D.
-0.0
-0.1
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
N.D.
-0.3
-0.1
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.4
N.D.
-0.0
-0.1
+0.1
nl-ccm
NL-CCM, start OD=0.3
-0.5
N.D.
+0.1
-0.1
+0.1
nf_with_fulln
NF_with_fullN
-0.1
N.D.
-0.2
+0.1
-0.2
mgl
MGL
-0.4
N.D.
+0.3
+0.1
-0.3
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.2
N.D.
+0.1
+0.1
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
+0.2
N.D.
-0.0
-0.0
-0.4
mgl
MGL
-0.4
N.D.
-0.2
-0.0
+0.4
nf_with10percent_fulln
NF_with10percent_fullN
+0.1
N.D.
-0.4
+0.0
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.3
N.D.
+0.1
+0.0
+0.0
mgl
MGL
+0.4
N.D.
-0.0
+0.0
-0.6
nf
NF
-0.3
N.D.
+0.2
-0.1
+0.1
nln
NLN
+0.2
N.D.
-0.3
+0.0
+0.0
nf_with_fulln
NF_with_fullN
+0.0
N.D.
-0.3
+0.2
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.2
N.D.
-0.1
+0.0
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
N.D.
-0.0
+0.0
+0.3
nln
NLN
+0.3
N.D.
-0.3
+0.0
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.1
N.D.
+0.3
+0.0
-0.2
nf
NF
+0.2
N.D.
-0.1
-0.0
+0.1
nln
NLN
+0.2
N.D.
-0.1
+0.0
+0.1
mgl
MGL
+0.4
N.D.
-0.0
-0.1
+0.3
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.3
N.D.
+0.2
-0.0
+0.2
nl-ccm_agar
NL-CCM_agar
+0.2
N.D.
+0.2
-0.0
+0.2
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