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Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_01567 and MPMX19_01568 overlap by 1 nucleotides
MPMX19_01568 and MPMX19_01569 are separated by 88 nucleotides
MPMX19_01569 and MPMX19_01570 are separated by 117 nucleotides
MPMX19_01570 and MPMX19_01571 are separated by 76 nucleotides
MPMX19_01567: MPMX19_01567 - Glutamyl-tRNA(Gln) amidotransferase subunit A, at 1,643,962 to 1,645,443
_01567
MPMX19_01568: MPMX19_01568 - Glutamyl-tRNA(Gln) amidotransferase subunit C, at 1,645,443 to 1,645,730
_01568
MPMX19_01569: MPMX19_01569 - hypothetical protein, at 1,645,819 to 1,646,136
_01569
MPMX19_01570: MPMX19_01570 - Mycothiol acetyltransferase, at 1,646,254 to 1,646,796
_01570
MPMX19_01571: MPMX19_01571 - Putative pre-16S rRNA nuclease, at 1,646,873 to 1,647,412
_01571
Group
Condition
MPMX19
_01567
MPMX19
_01568
MPMX19
_01569
MPMX19
_01570
MPMX19
_01571
nf_with_fulln
NF_with_fullN
N.D.
N.D.
N.D.
-0.3
N.D.
nf_with_fulln
NF_with_fullN
N.D.
N.D.
N.D.
-0.2
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
N.D.
N.D.
-0.2
N.D.
nf_with_fulln
NF_with_fullN
N.D.
N.D.
N.D.
-0.2
N.D.
nf_with_fulln
NF_with_fullN
N.D.
N.D.
N.D.
-0.2
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
N.D.
N.D.
-0.2
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
-0.1
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
-0.1
N.D.
nl-ccm
NL-CCM, start OD=0.3
N.D.
N.D.
N.D.
-0.1
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
N.D.
N.D.
-0.1
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
-0.1
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
N.D.
N.D.
-0.1
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
-0.1
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
N.D.
N.D.
-0.1
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
-0.1
N.D.
nl-ccm_agar
NL-CCM_agar
N.D.
N.D.
N.D.
-0.1
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
-0.1
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
N.D.
N.D.
+0.1
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
N.D.
N.D.
+0.1
N.D.
nl-ccm
NL-CCM, start OD=0.3
N.D.
N.D.
N.D.
+0.1
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
+0.1
N.D.
nl-ccm
NL-CCM, start OD=0.1
N.D.
N.D.
N.D.
+0.1
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
N.D.
+0.1
N.D.
mgl
MGL
N.D.
N.D.
N.D.
+0.1
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
N.D.
N.D.
+0.2
N.D.
mgl
MGL
N.D.
N.D.
N.D.
+0.2
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
N.D.
+0.2
N.D.
mgl
MGL
N.D.
N.D.
N.D.
+0.2
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
N.D.
+0.3
N.D.
mgl
MGL
N.D.
N.D.
N.D.
+0.3
N.D.
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