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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_01542 and MPMX19_01543 are separated by 155 nucleotides
MPMX19_01543 and MPMX19_01544 are separated by 104 nucleotides
MPMX19_01544 and MPMX19_01545 are separated by 198 nucleotides
MPMX19_01545 and MPMX19_01546 are separated by 206 nucleotides
MPMX19_01542: MPMX19_01542 - Pseudopaline exporter CntI, at 1,615,035 to 1,615,937
_01542
MPMX19_01543: MPMX19_01543 - tRNA-Val, at 1,616,093 to 1,616,167
_01543
MPMX19_01544: MPMX19_01544 - DNA-binding protein HU, at 1,616,272 to 1,616,544
_01544
MPMX19_01545: MPMX19_01545 - Lon protease, at 1,616,743 to 1,619,157
_01545
MPMX19_01546: MPMX19_01546 - hypothetical protein, at 1,619,364 to 1,621,436
_01546
Group
Condition
MPMX19
_01542
MPMX19
_01543
MPMX19
_01544
MPMX19
_01545
MPMX19
_01546
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
N.D.
N.D.
-2.0
-0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
N.D.
N.D.
-2.0
+0.0
nl-ccm_agar
NL-CCM_agar
-0.1
N.D.
N.D.
-1.9
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.2
N.D.
N.D.
-1.5
-0.3
nf
NF
+0.1
N.D.
N.D.
-1.8
-0.2
nln
NLN
-0.1
N.D.
N.D.
-1.7
-0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
N.D.
N.D.
-1.9
+0.0
nln
NLN
-0.1
N.D.
N.D.
-1.7
-0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.0
N.D.
N.D.
-1.7
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
N.D.
N.D.
-1.4
-0.2
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
+0.0
N.D.
N.D.
-1.7
-0.0
nl-ccm
NL-CCM, start OD=0.1
-0.0
N.D.
N.D.
-1.7
+0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
N.D.
N.D.
-1.7
+0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
+0.0
N.D.
N.D.
-1.5
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
N.D.
N.D.
-1.5
-0.0
nln
NLN
-0.1
N.D.
N.D.
-1.7
+0.1
nl-ccm_agar
NL-CCM_agar
+0.1
N.D.
N.D.
-1.7
-0.0
nln
NLN
-0.2
N.D.
N.D.
-1.3
-0.1
nf_with_fulln
NF_with_fullN
-0.3
N.D.
N.D.
-1.1
-0.1
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.1
N.D.
N.D.
-1.3
-0.1
nl-ccm
NL-CCM, start OD=0.1
-0.1
N.D.
N.D.
-1.5
+0.1
nf
NF
-0.0
N.D.
N.D.
-1.4
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
N.D.
N.D.
-1.3
+0.0
nl-ccm_agar
NL-CCM_agar
-0.0
N.D.
N.D.
-1.4
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.0
N.D.
N.D.
-1.3
+0.1
nl-ccm
NL-CCM, start OD=0.3
-0.1
N.D.
N.D.
-1.2
+0.1
nl-ccm_agar
NL-CCM_agar
+0.2
N.D.
N.D.
-1.4
+0.1
nl-ccm; spin-x control
NL-CCM; spin-x control
+0.1
N.D.
N.D.
-1.3
+0.1
nf
NF
+0.1
N.D.
N.D.
-1.2
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
+0.5
N.D.
N.D.
+1.1
+0.0
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