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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_01510 and MPMX19_01511 are separated by 178 nucleotides
MPMX19_01511 and MPMX19_01512 are separated by 23 nucleotides
MPMX19_01512 and MPMX19_01513 overlap by 8 nucleotides
MPMX19_01513 and MPMX19_01514 are separated by 51 nucleotides
MPMX19_01510: MPMX19_01510 - hypothetical protein, at 1,582,954 to 1,583,508
_01510
MPMX19_01511: MPMX19_01511 - HTH-type transcriptional activator RhaR, at 1,583,687 to 1,584,583
_01511
MPMX19_01512: MPMX19_01512 - Inner membrane protein YgaZ, at 1,584,607 to 1,585,329
_01512
MPMX19_01513: MPMX19_01513 - hypothetical protein, at 1,585,322 to 1,585,630
_01513
MPMX19_01514: MPMX19_01514 - Ribosomal RNA small subunit methyltransferase A, at 1,585,682 to 1,586,596
_01514
Group
Condition
MPMX19
_01510
MPMX19
_01511
MPMX19
_01512
MPMX19
_01513
MPMX19
_01514
mgl
MGL
-0.6
-0.2
-0.6
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.7
-0.1
+0.0
N.D.
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.3
-0.1
-0.4
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
-0.2
-0.3
N.D.
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.7
+0.1
-0.1
N.D.
N.D.
mgl
MGL
-0.4
+0.0
-0.2
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.4
-0.1
-0.1
N.D.
N.D.
mgl
MGL
-0.5
-0.1
-0.1
N.D.
N.D.
nl-ccm_agar
NL-CCM_agar
-0.6
-0.1
+0.0
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.4
-0.0
-0.1
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
-0.1
-0.3
N.D.
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.4
-0.0
-0.1
N.D.
N.D.
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.4
-0.0
-0.2
N.D.
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.5
+0.0
-0.1
N.D.
N.D.
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.5
+0.1
-0.1
N.D.
N.D.
nl-ccm_agar
NL-CCM_agar
-0.4
-0.1
-0.0
N.D.
N.D.
nl-ccm_agar
NL-CCM_agar
-0.3
+0.1
-0.2
N.D.
N.D.
nln
NLN
-0.3
+0.1
-0.1
N.D.
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.4
+0.0
+0.0
N.D.
N.D.
nln
NLN
-0.3
+0.1
-0.1
N.D.
N.D.
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.4
-0.0
+0.2
N.D.
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.6
+0.1
+0.3
N.D.
N.D.
nf_with_fulln
NF_with_fullN
-0.4
-0.0
+0.3
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.4
-0.1
+0.3
N.D.
N.D.
nf_with_fulln
NF_with_fullN
+0.3
-0.1
-0.3
N.D.
N.D.
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.3
-0.0
+0.2
N.D.
N.D.
mgl
MGL
+0.6
-0.5
-0.2
N.D.
N.D.
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.4
+0.1
+0.3
N.D.
N.D.
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
+0.1
+0.2
N.D.
N.D.
nf_with_fulln
NF_with_fullN
+0.4
+0.0
-0.1
N.D.
N.D.
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