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Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_01465 and MPMX19_01466 are separated by 11 nucleotides
MPMX19_01466 and MPMX19_01467 overlap by 4 nucleotides
MPMX19_01467 and MPMX19_01468 are separated by 51 nucleotides
MPMX19_01468 and MPMX19_01469 are separated by 9 nucleotides
MPMX19_01465: MPMX19_01465 - D-alanyl-D-alanine carboxypeptidase DacC, at 1,537,486 to 1,538,688
_01465
MPMX19_01466: MPMX19_01466 - Thymidylate kinase, at 1,538,700 to 1,539,359
_01466
MPMX19_01467: MPMX19_01467 - hypothetical protein, at 1,539,356 to 1,540,486
_01467
MPMX19_01468: MPMX19_01468 - Methionine--tRNA ligase, at 1,540,538 to 1,542,088
_01468
MPMX19_01469: MPMX19_01469 - putative metal-dependent hydrolase YcfH, at 1,542,098 to 1,542,892
_01469
Group
Condition
MPMX19
_01465
MPMX19
_01466
MPMX19
_01467
MPMX19
_01468
MPMX19
_01469
mgl
MGL
N.D.
N.D.
N.D.
N.D.
-0.7
mgl
MGL
N.D.
N.D.
N.D.
N.D.
-0.7
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
N.D.
N.D.
N.D.
-0.5
mgl
MGL
N.D.
N.D.
N.D.
N.D.
-0.5
mgl
MGL
N.D.
N.D.
N.D.
N.D.
-0.3
mgl
MGL
N.D.
N.D.
N.D.
N.D.
-0.3
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
N.D.
N.D.
N.D.
-0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
N.D.
N.D.
N.D.
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
N.D.
N.D.
N.D.
-0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
N.D.
-0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
N.D.
N.D.
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
N.D.
N.D.
N.D.
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
N.D.
-0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
N.D.
N.D.
N.D.
-0.2
nf
NF
N.D.
N.D.
N.D.
N.D.
+0.2
nln
NLN
N.D.
N.D.
N.D.
N.D.
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
N.D.
N.D.
+0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
N.D.
N.D.
N.D.
+0.2
nln
NLN
N.D.
N.D.
N.D.
N.D.
+0.2
nln
NLN
N.D.
N.D.
N.D.
N.D.
+0.3
nf_with_fulln
NF_with_fullN
N.D.
N.D.
N.D.
N.D.
+0.5
nf_with_fulln
NF_with_fullN
N.D.
N.D.
N.D.
N.D.
+0.5
nf_with_fulln
NF_with_fullN
N.D.
N.D.
N.D.
N.D.
+0.5
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
N.D.
N.D.
+0.6
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
N.D.
N.D.
+0.6
nf_with_fulln
NF_with_fullN
N.D.
N.D.
N.D.
N.D.
+0.6
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
N.D.
N.D.
+0.6
nf_with_fulln
NF_with_fullN
N.D.
N.D.
N.D.
N.D.
+0.7
nf_with_fulln
NF_with_fullN
N.D.
N.D.
N.D.
N.D.
+0.8
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
N.D.
N.D.
N.D.
+0.9
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