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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_01375 and MPMX19_01376 are separated by 15 nucleotides
MPMX19_01376 and MPMX19_01377 are separated by 59 nucleotides
MPMX19_01377 and MPMX19_01378 are separated by 193 nucleotides
MPMX19_01378 and MPMX19_01379 are separated by 96 nucleotides
MPMX19_01375: MPMX19_01375 - 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial, at 1,431,711 to 1,432,607
_01375
MPMX19_01376: MPMX19_01376 - hypothetical protein, at 1,432,623 to 1,436,987
_01376
MPMX19_01377: MPMX19_01377 - Outer membrane protein assembly factor BamA, at 1,437,047 to 1,439,098
_01377
MPMX19_01378: MPMX19_01378 - GTP-binding protein TypA/BipA, at 1,439,292 to 1,441,118
_01378
MPMX19_01379: MPMX19_01379 - hypothetical protein, at 1,441,215 to 1,442,888
_01379
Group
Condition
MPMX19
_01375
MPMX19
_01376
MPMX19
_01377
MPMX19
_01378
MPMX19
_01379
nln
NLN
N.D.
-2.2
-1.1
N.D.
+0.0
nln
NLN
N.D.
-2.1
-1.0
N.D.
+0.0
nf_with_fulln
NF_with_fullN
N.D.
-1.8
-1.0
N.D.
-0.0
nln
NLN
N.D.
-1.5
-1.2
N.D.
+0.0
nln
NLN
N.D.
-1.5
-1.2
N.D.
+0.1
nln
NLN
N.D.
-2.1
-0.5
N.D.
+0.1
mgl
MGL
N.D.
-1.5
-1.1
N.D.
+0.0
mgl
MGL
N.D.
-1.3
-0.6
N.D.
+0.1
nf_with_fulln
NF_with_fullN
N.D.
-1.1
-0.7
N.D.
+0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
-1.4
-0.4
N.D.
+0.0
nf_with_fulln
NF_with_fullN
N.D.
-1.2
-0.5
N.D.
+0.0
nf_with_fulln
NF_with_fullN
N.D.
-0.8
-0.8
N.D.
+0.0
nf_with_fulln
NF_with_fullN
N.D.
-1.0
-0.6
N.D.
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
N.D.
-0.7
-0.5
N.D.
-0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
-0.8
-0.4
N.D.
+0.0
nf_with_fulln
NF_with_fullN
N.D.
-1.0
-0.1
N.D.
+0.0
nl-ccm_agar
NL-CCM_agar
N.D.
-0.3
-0.8
N.D.
+0.0
mgl
MGL
N.D.
-0.6
-0.4
N.D.
+0.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
N.D.
-0.8
-0.4
N.D.
+0.1
nl-ccm; low oxygen
NL-CCM; low oxygen
N.D.
-1.0
-0.0
N.D.
+0.0
nf
NF
N.D.
-0.6
-0.4
N.D.
+0.1
nl-ccm; high oxygen
NL-CCM; high oxygen
N.D.
-0.3
-0.7
N.D.
+0.1
nl-ccm
NL-CCM, start OD=0.3
N.D.
-1.0
-0.1
N.D.
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
-0.7
-0.2
N.D.
+0.1
nl-ccm
NL-CCM, start OD=0.3
N.D.
-0.5
-0.6
N.D.
+0.3
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
N.D.
-0.7
-0.2
N.D.
+0.1
nln
NLN
N.D.
-0.4
-0.4
N.D.
+0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
N.D.
+0.4
-0.4
N.D.
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
N.D.
+0.5
-0.5
N.D.
+0.2
nl-ccm
NL-CCM, start OD=0.1
N.D.
+0.7
-0.4
N.D.
+0.2
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