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Protein
Homologs
Fitness for 5 genes in
Azospirillum sp. SherDot2
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MPMX19_01328 and MPMX19_01329 are separated by 17 nucleotides
MPMX19_01329 and MPMX19_01330 are separated by 54 nucleotides
MPMX19_01330 and MPMX19_01331 overlap by 4 nucleotides
MPMX19_01331 and MPMX19_01332 overlap by 25 nucleotides
MPMX19_01328: MPMX19_01328 - Cysteine synthase, at 1,382,815 to 1,383,816
_01328
MPMX19_01329: MPMX19_01329 - Alanine--tRNA ligase, at 1,383,834 to 1,384,541
_01329
MPMX19_01330: MPMX19_01330 - 3-mercaptopyruvate sulfurtransferase, at 1,384,596 to 1,385,483
_01330
MPMX19_01331: MPMX19_01331 - Acetyltransferase YpeA, at 1,385,480 to 1,385,914
_01331
MPMX19_01332: MPMX19_01332 - hypothetical protein, at 1,385,890 to 1,386,507
_01332
Group
Condition
MPMX19
_01328
MPMX19
_01329
MPMX19
_01330
MPMX19
_01331
MPMX19
_01332
mgl
MGL
-0.0
+0.2
-1.8
+0.1
-0.2
mgl
MGL
+0.1
+0.0
-1.5
+0.0
-0.2
mgl
MGL
-0.1
-0.4
-0.4
-0.4
-0.0
nln
NLN
-0.3
-0.5
-0.2
-0.2
-0.2
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
-0.6
-0.4
-0.1
-0.2
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.1
-0.2
-0.8
-0.1
-0.1
mgl
MGL
-0.1
-0.4
-0.6
-0.1
-0.0
nl-ccm; high oxygen
NL-CCM; high oxygen
-0.3
-0.2
-0.7
-0.0
+0.0
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
-0.0
-0.8
-0.1
+0.0
nl-ccm
NL-CCM, start OD=0.1
-0.1
+0.1
-0.9
-0.1
-0.0
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
-0.0
-0.7
-0.1
-0.0
nf_with10percent_fulln
NF_with10percent_fullN
-0.5
+0.3
-0.4
-0.1
-0.2
nl-ccm; spin-x control
NL-CCM; spin-x control
-0.1
-0.2
-0.5
-0.1
-0.0
nl-ccm
NL-CCM, start OD=0.3
-0.0
-0.1
-0.9
-0.0
+0.2
mixed community
NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
-0.0
-0.1
-0.6
+0.1
-0.2
nl-ccm; low oxygen
NL-CCM; low oxygen
-0.1
-0.1
-0.5
+0.0
-0.1
nl-ccm; ambient oxygen
NL-CCM; ambient oxygen
-0.1
-0.5
-0.1
+0.0
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.0
-0.4
-0.4
+0.1
+0.0
nf_with_fulln
NF_with_fullN
-0.2
+0.3
-0.7
+0.0
+0.0
nln
NLN
-0.0
+0.1
-0.6
+0.1
-0.1
mixed community
NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
-0.1
-0.5
+0.3
-0.1
-0.1
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
+0.3
-0.7
+0.1
+0.0
nf_with10percent_fulln
NF_with10percent_fullN
-0.2
+0.4
-0.6
-0.2
+0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.1
+0.5
-0.7
-0.0
-0.1
nf_with_fulln
NF_with_fullN
-0.3
-0.1
+0.3
+0.1
-0.0
mixed community
NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
-0.1
+0.2
+0.3
-0.1
-0.0
mgl
MGL
-0.1
+0.1
+0.5
+0.1
-0.2
nf_with10percent_fulln
NF_with10percent_fullN
-0.3
+0.4
+0.3
-0.0
-0.1
nf_with_fulln
NF_with_fullN
-0.1
+0.3
+0.1
+0.1
-0.1
nf_with_fulln
NF_with_fullN
-0.0
+0.5
+0.6
-0.1
+0.0
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